Gene
| Gene Model ID | pfu_aug1.0_2511.1_15849 |
|---|---|
| Locus | scaffold2511.1 : 52036 ... 62953 : + |
| To GenomeBrowser | scaffold2511.1:52036..62953 |
| Genes list of scaffold | scaffold2511.1 |
| Synonym | pfu_aug2.0_857.1_24472 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2511.1_15849.t1 | 1 | 1 | ADK | 1 | 157 | 7.84727e-44 | 149.1 | 0.0 | 9.52883e-44 | 148.9 |
| pfu_aug1.0_2511.1_15849.t1 | 2 | 1 | ADK_lid | 94 | 129 | 1.9e-14 | 52.9 | 1.1e-17 | 8.0e-14 | 51.0 |
| pfu_aug1.0_2511.1_15849.t1 | 2 | 2 | ADK_lid | 141 | 148 | 1.9e-14 | 52.9 | 0.22 | 1700.0 | -1.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| egg-Dshape | 3 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2511.1_15849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2511.1_15849.t1 atgctgcgagcggttgtggcatctgggtcagagttaggtaaacaggtcaaatctgtgatggacgctggtcagttagtgac cgatgagctggtcattaagatgatcgatcagaatctggacaaaccggcatgtaaaaatggctttctattggatggattcc cacgaacagtcaaacaagcagaggctttagatacactgctagcagggagaaaacagaagttagacgcctgtgtagaattc gctatcgatgattccctattggtcaggagaattaccggacgtcttatccacacaccaagtggaaggtcatatcacgtaga attcaaccccccaaagaaagagatgactgatgatgtgactggagagccgttaattcggaggtcagacgataacgaggaag ctctacgtaaacgactagattcataccacaaacagacaaagccgctggtagattactatagcaaacagggtcttcacact gcagtcgatgccaaacagaaacccagcgtagtgtttgccgctatacaagccatatttacagctagcaggaaagataaagt catgttcatgaattaa |
|
Protein
| Protein ID | pfu_aug1.0_2511.1_15849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2511.1_15849.t1 MLRAVVASGSELGKQVKSVMDAGQLVTDELVIKMIDQNLDKPACKNGFLLDGFPRTVKQAEALDTLLAGRKQKLDACVEF AIDDSLLVRRITGRLIHTPSGRSYHVEFNPPKKEMTDDVTGEPLIRRSDDNEEALRKRLDSYHKQTKPLVDYYSKQGLHT AVDAKQKPSVVFAAIQAIFTASRKDKVMFMN |
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