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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_25132.1_04418
Locus scaffold25132.1 : 5526 ... 14883 : +
To GenomeBrowser scaffold25132.1:5526..14883
Genes list of scaffold scaffold25132.1
Synonym pfu_aug2.0_856.1_21218

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_25132.1_04418.t1 1 1 7tm_1 105 333 2.2e-15 56.5 8.5e-19 3.1e-15 55.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_25132.1_04418.t1 gi|350018315|dbj|GAA37356.1| 2.0e-17

Transcript
Transcript IDpfu_aug1.0_25132.1_04418.t1
Definition-
>pfu_aug1.0_25132.1_04418.t1
atgacaagtgtgacaggttttgtgaacaacaccatggcggtagtgtcctttgatggtcgatctacacctttgtgtatcga
cagaaattctttttctgatggtccaattgcaacgactagcccaacgtttggtttcacaaatactacttttgatgttgtta
cagcgctaaacacggtacaaaattccactttgccgttctgtgacgaagattccggatccccaactgactcaatttctaac
tactgggagtacgcagcagctacattcatcaacaaatattacctatacgccatagttgctatagggttgcctggcaactt
agctgccctagcaacagtgctagcaatgaagcctttcgtgtcgtcatcactatatatggcgactctggccatatttgatt
ccatcaaccttataatcaagattttgtatctccaattgactctacatgacatacaattgtttgacattggatgtaaatta
atgttcttccttggaacttttttcatgcatctggcaaactggattttagttgccatgacaatagaacgatttgttgctat
atggttcccactaaaagtaacagacatctgcactaaaaacaaagccatgttagcgattaccatattgatgatattgttga
taggacttaaccttcacttcatgataaccatgcacgaggtcagtgatccacggtatatctacagctgtaaattcaaggaa
gagtacatgtactttaatgagaacatttggtactggattgatggcgctgcgtactcactcctaccgtttttagctctgac
tatattcaatgttatgatagttattggtatcaacaagtcggcaaagacacagaaagccttaacaaacaaacaagcaaagg
agaaaatgtcacagcaatatcagattacggtaataatgctcacagtgattatgatctttattaaactctttatgaaggta
atgttgctcacagtgagcgttgtgattattcagtataatgatctttattttactctctatacaggtaatgttgctcacag
tgactatgatctttatttaactctctatacaggtaatgttgctcacagtgattatgatctttatttaactctctatacag
gtaatgttggtcacagtgagcgtggtgttcgtcctactgactatgcctaa

Protein
Protein IDpfu_aug1.0_25132.1_04418.t1
Definition-
>pfu_aug1.0_25132.1_04418.t1
MTSVTGFVNNTMAVVSFDGRSTPLCIDRNSFSDGPIATTSPTFGFTNTTFDVVTALNTVQNSTLPFCDEDSGSPTDSISN
YWEYAAATFINKYYLYAIVAIGLPGNLAALATVLAMKPFVSSSLYMATLAIFDSINLIIKILYLQLTLHDIQLFDIGCKL
MFFLGTFFMHLANWILVAMTIERFVAIWFPLKVTDICTKNKAMLAITILMILLIGLNLHFMITMHEVSDPRYIYSCKFKE
EYMYFNENIWYWIDGAAYSLLPFLALTIFNVMIVIGINKSAKTQKALTNKQAKEKMSQQYQITVIMLTVIMIFIKLFMKV
MLLTVSVVIIQYNDLYFTLYTGNVAHSDYDLYLTLYTGNVAHSDYDLYLTLYTGNVGHSERGVRPTDYA

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