Gene
| Gene Model ID | pfu_aug1.0_2520.1_30145 |
|---|---|
| Locus | scaffold2520.1 : 17403 ... 31585 : - |
| To GenomeBrowser | scaffold2520.1:17403..31585 |
| Genes list of scaffold | scaffold2520.1 |
| Synonym | pfu_aug2.0_556.1_20905 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2520.1_30145.t1 | 1 | 1 | BTB_2 | 133 | 232 | 2.1e-33 | 114.3 | 3.1e-37 | 4.6e-33 | 113.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2520.1_30145.t1 | gi|2315214|emb|CAA74748.1| | Kv2 voltage-gated potassium channel [Doryteuthis pealeii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2520.1_30145.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2520.1_30145.t1 atgcttcaggtggggacctgtgcggtagccaacgaaggctcggggtctcaaggtcgagaagagactacagtcaactattc caccagggccacctccctgcgtcgtccggagaagaggaagcattcattagcttacgaggaagctcagcgggagcgtaggg agcacaaggcgaggccgcgggatagtatcaaacccgaggtaaagatagcgccaaaccctgtcatttctgcctaccctacc gacgttgttatgactgcagatgcagacgcctgtagttcccagactgccaatctggggatagaggtggtgcctagtccggg aagatactacataccgagtggtaacgcaccaccaaatccaacttctatacggaagagcaaggagatgtctaaacgagtga tcttaaacgtgggtggagtcaaacacgaggtgatgtggaggacattggaccgaatgccccacaccagactcggcaagtta aaactgtgtaatactcatgaggatctaatgaatatatgtgatgattatactctggaagctaatgagtatttctttgatcg ccatcctcgatctttttcttccattttgaatttctatcgcacgggtaaattacacttagtggaggagatgtgtgttttat catttagtgaggatttagaatattggggtatagacgaactgtacctagaatcttgttgtcagcacaaatataatcagaaa aaggaacatgtgtatgaggaaattcgaaaggaagcagaaagtctgcgacaacgggaggaggaggattttgggacaggggt ttgctccccttggaggaagaaagtatgggatttactagagaaacctacaacgtcaatggccgctaggaagcagttgcaga aatcctcatga |
|
Protein
| Protein ID | pfu_aug1.0_2520.1_30145.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2520.1_30145.t1 MLQVGTCAVANEGSGSQGREETTVNYSTRATSLRRPEKRKHSLAYEEAQRERREHKARPRDSIKPEVKIAPNPVISAYPT DVVMTADADACSSQTANLGIEVVPSPGRYYIPSGNAPPNPTSIRKSKEMSKRVILNVGGVKHEVMWRTLDRMPHTRLGKL KLCNTHEDLMNICDDYTLEANEYFFDRHPRSFSSILNFYRTGKLHLVEEMCVLSFSEDLEYWGIDELYLESCCQHKYNQK KEHVYEEIRKEAESLRQREEEDFGTGVCSPWRKKVWDLLEKPTTSMAARKQLQKSS |
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