Gene
| Gene Model ID | pfu_aug1.0_25205.1_62360 |
|---|---|
| Locus | scaffold25205.1 : 1 ... 8255 : - |
| To GenomeBrowser | scaffold25205.1:1..8255 |
| Genes list of scaffold | scaffold25205.1 |
| Synonym | pfu_aug2.0_269.1_30538 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25205.1_62360.t1 | 1 | 1 | MT-A70 | 251 | 357 | 3.3e-26 | 91.9 | 1.4e-29 | 6.8e-26 | 90.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25205.1_62360.t1 | gi|300796976|ref|NP_001178743.1| | methyltransferase-like protein 4 [Rattus norvegicus] | 1.96182e-44 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_25205.1_62360.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25205.1_62360.t1 atgggtttggcccaggctctaaagggcactatctccaaggaaaaggatattgagatagtcaaagatatgatgttaaagaa ggaattgtttctgatagaacaaccatttatgatggacagtcaattttctgccatgcaggacaaaactgagtctaaaactg tccagggaaaagatgtgaagcgaaagagaaaaagaaaatcagaaataaccactggagaggaaagatttaaggaatatcat gaacaaatctgcagtattatagtaactgcatatgaaaaccttcttgaagcagcatatgaacaaaaatactttaaaaaaca agaggaaagtgagggaaatttaccatctgaaataatttctggcagtggaggtgagacatcaattgcgcaaaaagttgtca ctaacaattttcaagctgagttagatggaagtttgatagcattggcagacaacaatagaactgcaagggatgcagccata aaacttcagggtactgcagaaatacttagtgagctttgcttctcaaggagagaaatgtcaagttccatgcctaaagttat aaataaactcaacccagatattctgcattggaaactggatccatttaacaaagtgataagtaatttatgtggccatccag ctgtatttaatttcgatggagacaaatatatcctacccactgactctacattcttcttgagtgacttctcaaatatagag gaactgatttcttacaatgagttgtcttcctttgactgtattgtgatcgatccaccatgggaaaataaatcagtgaagag gaagaaaatgtacaaaactctgacgagccaggatttttctaagattcctatccctagactagcagcccataatgccctta tcatcgtgtgggtaaccaataggatgaagcatgtagatttcataaaggaatatctgtttcctgcatgggatgtacagtat ctcacagactggttctggatcaaggtaacaacaaaaggtgaaatggtgtatgacatcaactctgaccacaagaagccgta cgagctgatggtactaggacgccgcaatgagttatcacactaa |
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Protein
| Protein ID | pfu_aug1.0_25205.1_62360.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25205.1_62360.t1 MGLAQALKGTISKEKDIEIVKDMMLKKELFLIEQPFMMDSQFSAMQDKTESKTVQGKDVKRKRKRKSEITTGEERFKEYH EQICSIIVTAYENLLEAAYEQKYFKKQEESEGNLPSEIISGSGGETSIAQKVVTNNFQAELDGSLIALADNNRTARDAAI KLQGTAEILSELCFSRREMSSSMPKVINKLNPDILHWKLDPFNKVISNLCGHPAVFNFDGDKYILPTDSTFFLSDFSNIE ELISYNELSSFDCIVIDPPWENKSVKRKKMYKTLTSQDFSKIPIPRLAAHNALIIVWVTNRMKHVDFIKEYLFPAWDVQY LTDWFWIKVTTKGEMVYDINSDHKKPYELMVLGRRNELSH |
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