Gene
| Gene Model ID | pfu_aug1.0_2524.1_08336 |
|---|---|
| Locus | scaffold2524.1 : 12738 ... 21375 : - |
| To GenomeBrowser | scaffold2524.1:12738..21375 |
| Genes list of scaffold | scaffold2524.1 |
| Synonym | pfu_aug2.0_646.1_21016 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2524.1_08336.t1 | 1 | 1 | RLI | 58 | 90 | 1.2e-14 | 53.5 | 3.0e-18 | 2.2e-14 | 52.7 |
| pfu_aug1.0_2524.1_08336.t1 | 1 | 1 | DUF367 | 95 | 221 | 0.0 | 179.2 | 0.0 | 0.0 | 178.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2524.1_08336.t1 | gi|115717721|ref|XP_791704.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2524.1_08336.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2524.1_08336.t1 atgaaaaggagtaaacagaaaagtaaacaacaacacagcaaacagaatgagagaagaggacagcgagatcgtagattcgt acatgttcatgaagaagaatttagcagccaggcaagctgtcaaaatgaggatgaagaggtgccgtcatgggcagctgaga aatttccatgtcacttggccatgtgggacctcggacattgtgaccccaaaaaatgtagcggcagaaagctggctcgtctt ggctatgtcagaaatatgaagctgcaacagagattcaatggcttgattctgtcccctatgggaaccaagtgtgtctcacc cgcagacagggaaatagtggaacagcatggcgtggctgttgttgactgctcatgggcgaggctggaggacactcccttta gtaggataaggggaggcaaccctcggcttttaccatttctcgtggccaccaatcctgtgaactatggcaaaccttgtacg ttatcctgtgtcgaggcttatgcagcagcattgtacataactggatacaaggaacttggagagatccttttaaagaagtt caagtggggacataatttctttgagctgaatcaggaaattttagacaaatatacaggatgcaaagacagtgcagaagtcg tagcaacgcagcaggagtatttaacccagacttctaaaagacgagatgaggaagacagttatgatatgactgatattgat ttggatattgatcatttcaatccaaaccatcgagttggagagttacccccttctgaatcgtctgaggaagaagattcaga tgatgattgtgaaaatgaagaagtttgtgaagaaaactacaatgaagatattgattgtgaagatggaaatgacagagata gtgcctgtgatagtgaagataataataaacatagtgatggtgaagatacagagactagtagtaaaaataatgaagataca tgtagtaatactgaagataaggaaagaagaaatcgtgaaaataatgaggacaacaaaggaagaagcaatacggaaattta tgatccaagtgatattttgacagacaaagtaggtactagtcaagcaagtaacagtccagagcagccgcaaaaatctctgg ttgacagcatcacgaacgaaatgttgacagctgttatacttaatgatgataaaaaatga |
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Protein
| Protein ID | pfu_aug1.0_2524.1_08336.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2524.1_08336.t1 MKRSKQKSKQQHSKQNERRGQRDRRFVHVHEEEFSSQASCQNEDEEVPSWAAEKFPCHLAMWDLGHCDPKKCSGRKLARL GYVRNMKLQQRFNGLILSPMGTKCVSPADREIVEQHGVAVVDCSWARLEDTPFSRIRGGNPRLLPFLVATNPVNYGKPCT LSCVEAYAAALYITGYKELGEILLKKFKWGHNFFELNQEILDKYTGCKDSAEVVATQQEYLTQTSKRRDEEDSYDMTDID LDIDHFNPNHRVGELPPSESSEEEDSDDDCENEEVCEENYNEDIDCEDGNDRDSACDSEDNNKHSDGEDTETSSKNNEDT CSNTEDKERRNRENNEDNKGRSNTEIYDPSDILTDKVGTSQASNSPEQPQKSLVDSITNEMLTAVILNDDKK |
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