Gene
| Gene Model ID | pfu_aug1.0_25254.1_11683 |
|---|---|
| Locus | scaffold25254.1 : 6791 ... 8271 : - |
| To GenomeBrowser | scaffold25254.1:6791..8271 |
| Genes list of scaffold | scaffold25254.1 |
| Synonym | pfu_aug2.0_2729.1_32281 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25254.1_11683.t1 | 2 | 1 | zf-C2H2_4 | 11 | 33 | 2.0e-10 | 40.2 | 5.7e-08 | 5.7e-05 | 23.1 |
| pfu_aug1.0_25254.1_11683.t1 | 2 | 1 | zf-C2H2 | 11 | 33 | 3.1e-09 | 36.6 | 7.4e-06 | 0.0073 | 16.5 |
| pfu_aug1.0_25254.1_11683.t1 | 3 | 1 | zf-H2C2_2 | 11 | 22 | 2.6e-06 | 27.4 | 0.0036 | 3.6 | 8.0 |
| pfu_aug1.0_25254.1_11683.t1 | 3 | 2 | zf-H2C2_2 | 26 | 50 | 2.6e-06 | 27.4 | 3.8e-06 | 0.0037 | 17.4 |
| pfu_aug1.0_25254.1_11683.t1 | 2 | 2 | zf-C2H2_4 | 39 | 62 | 2.0e-10 | 40.2 | 2.2e-07 | 0.00022 | 21.3 |
| pfu_aug1.0_25254.1_11683.t1 | 2 | 2 | zf-C2H2 | 39 | 62 | 3.1e-09 | 36.6 | 8.5e-08 | 8.4e-05 | 22.6 |
| pfu_aug1.0_25254.1_11683.t1 | 3 | 3 | zf-H2C2_2 | 54 | 62 | 2.6e-06 | 27.4 | 0.15 | 150.0 | 2.9 |
Transcript
| Transcript ID | pfu_aug1.0_25254.1_11683.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25254.1_11683.t1 aaaactaaacacctgggtatcctcggagattttgcttgccaagtgtgtgggaggcgatttctgacggccacgtttctacg tcagcacgtagcggcccactcggacgtcaggccgttcgcctgtaatcgatgcagcaagtcctataaacgcaagcacgaac tgctaaaacaccagcgagacatgcacccgtggaaatga |
|
Protein
| Protein ID | pfu_aug1.0_25254.1_11683.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25254.1_11683.t1 KTKHLGILGDFACQVCGRRFLTATFLRQHVAAHSDVRPFACNRCSKSYKRKHELLKHQRDMHPWK |
|