Gene
| Gene Model ID | pfu_aug1.0_253.1_00206 |
|---|---|
| Locus | scaffold253.1 : 33787 ... 37855 : - |
| To GenomeBrowser | scaffold253.1:33787..37855 |
| Genes list of scaffold | scaffold253.1 |
| Synonym | NA |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | G-protein coupled receptor |
| Description | Similar (28%) to XP_002403479.1| G-protein coupled octopamine receptor, putative [Ixodes scapularis |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_253.1_00206.t1 | 1 | 1 | 7TM_GPCR_Srsx | 79 | 326 | 4.2e-08 | 32.6 | 1.0e-11 | 7.4e-08 | 31.8 |
| pfu_aug1.0_253.1_00206.t1 | 1 | 1 | 7tm_1 | 84 | 350 | 1.7e-32 | 112.5 | 3.4e-36 | 2.5e-32 | 112.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_253.1_00206.t1 | gi|240980460|ref|XP_002403479.1| | G-protein coupled octopamine receptor, putative [Ixodes scapularis] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_253.1_00206.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_253.1_00206.t1 atggacacgactacctcgatatggagctatgcagaaagcctgataaacgacacagtagtagacaccacggtgattccctt caaccagaacaccacaggtctcggcttgtatacaaacttcgtcagttacataaactctactacatgggccaatctacagc ctcagaatttccaagatcgtgcagacaagatcctaaaacagccagacacaattgtcagattaatcttgtgcagtctggct ctagtcacaaacattctctccataatggctaccgctaacatcccgaaaggactatcgatgcattccaaattaatcataag cttagccattgcagatatgatagtacctattagtatttttatgtatatactcaacaaagtgttgaacactccgaaagtcg gtcgtctgttcacgccggaagaaaggttgtcgtctgcgtgcatgtttcagtttgtcaattcgatcaacgtcatggctcat cttatttctttgttcaatctttttgcaatggctctggaccactacattgctattatgaaaccacttcactatattcatat catgaatagatttcgaggaaatttgctcattatagttttgtgggtcactgccttcgctggtggattttctagctttctag ctggatttacgggtccagacaaaaatgacagatacctgaacttctgtgagaagatattttccgctgagtatcaagcagaa tacattcccgtagtagctacattcatttgtttgggattgattttattcatttacatacgaatttatttcgaagtgaaaag tatggcagcaaatgtggcaccgtttgaaaacgacgagatgcacaacaacaaagcgcgatggacgaccttagtgatcatcg gaacgtttgtcgtctgctggttgccctatatgacctttcaagttgtcatggtgatacaaatacacatcgattccgaatct gtgcagaaactttttgctatattcctcaagacgaacaagtatttatatgccttacttcttgtgaattgtattctggaccc tataatttatgccgtgcgactaaaacacgtgcaacagggatatatacacatgcttgcgcggtgctccaaagtctatcgga ggaaaatacacgaggaagaagtaagcttgtcaaatcccgccttttcgatgtcaaggaaaaaatctgacatcacaggacga atgtcaatttcacatggacatttcggaaatgacgtcaacgaagtgaatgaactgacacccatgaatgaggaaaggactga attcagtgagctaaattcatctatgaatgggaatgtcgacagccgcgaatatacgaaggttgtcattaacgacagcaatc ataattacgcaaattgctcaagacaagatattgaaaatgtatcatag |
|
Protein
| Protein ID | pfu_aug1.0_253.1_00206.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_253.1_00206.t1 MDTTTSIWSYAESLINDTVVDTTVIPFNQNTTGLGLYTNFVSYINSTTWANLQPQNFQDRADKILKQPDTIVRLILCSLA LVTNILSIMATANIPKGLSMHSKLIISLAIADMIVPISIFMYILNKVLNTPKVGRLFTPEERLSSACMFQFVNSINVMAH LISLFNLFAMALDHYIAIMKPLHYIHIMNRFRGNLLIIVLWVTAFAGGFSSFLAGFTGPDKNDRYLNFCEKIFSAEYQAE YIPVVATFICLGLILFIYIRIYFEVKSMAANVAPFENDEMHNNKARWTTLVIIGTFVVCWLPYMTFQVVMVIQIHIDSES VQKLFAIFLKTNKYLYALLLVNCILDPIIYAVRLKHVQQGYIHMLARCSKVYRRKIHEEEVSLSNPAFSMSRKKSDITGR MSISHGHFGNDVNEVNELTPMNEERTEFSELNSSMNGNVDSREYTKVVINDSNHNYANCSRQDIENVS |
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