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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_253.1_00210
Locus scaffold253.1 : 100726 ... 116999 : +
To GenomeBrowser scaffold253.1:100726..116999
Genes list of scaffold scaffold253.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_253.1_00210.t1 1 1 Galactosyl_T 2 83 1.0e-17 64.3 2.2e-21 1.7e-17 63.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_253.1_00210.t1 gi|291236803|ref|XP_002738327.1| PREDICTED: beta-1,3-galactosyltransferase 1-like [Saccoglossus kowalevskii] 1.0e-12

Transcript
Transcript IDpfu_aug1.0_253.1_00210.t1
Definition-
>pfu_aug1.0_253.1_00210.t1
atgcttggattgaaatggtttcgtacgagatgtccaaatgcgaaatatattttaaaaactgacgatgacgtgtacgtcaa
tattccgggtttgaaagacctgatctcgacttatagtcatctgttggaaacttccgttgctggaacttgtttcctgaata
taactccggatagaaatgttaattcgaaatggtacgtcagcgaggaggagtaccccaagaaaacttaccccggatactgt
tcaggttctcataccgctgccaatgagagaaactcttgtttttcaatcatacgaagaaagaaatttaaatatgctaacgt
gaactactatacaggaaatatcatcatgacagttcccaaaatgatggaatatcgttctatcgggaaattccttaatatta
acctgaaatgcgcggatttagaaagagtctgcccaaatctcttggtcaccgccatcttgttttgctatgtcggcacgata
cgacgtcataataaactactcgcccgatacggatttacaagcctgatacagcttttttcacggcatcatgtgaccatgat
ctga

Protein
Protein IDpfu_aug1.0_253.1_00210.t1
Definition-
>pfu_aug1.0_253.1_00210.t1
MLGLKWFRTRCPNAKYILKTDDDVYVNIPGLKDLISTYSHLLETSVAGTCFLNITPDRNVNSKWYVSEEEYPKKTYPGYC
SGSHTAANERNSCFSIIRRKKFKYANVNYYTGNIIMTVPKMMEYRSIGKFLNINLKCADLERVCPNLLVTAILFCYVGTI
RRHNKLLARYGFTSLIQLFSRHHVTMI

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