Gene
Gene Model ID | pfu_aug1.0_253.1_00212 |
---|---|
Locus | scaffold253.1 : 135609 ... 157535 : - |
To GenomeBrowser | scaffold253.1:135609..157535 |
Genes list of scaffold | scaffold253.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_253.1_00212.t1 | 3 | 1 | WW | 98 | 124 | 3.9e-11 | 42.5 | 2.1e-09 | 3.1e-05 | 23.7 |
pfu_aug1.0_253.1_00212.t1 | 3 | 2 | WW | 176 | 190 | 3.9e-11 | 42.5 | 0.0004 | 5.9 | 6.8 |
pfu_aug1.0_253.1_00212.t1 | 3 | 3 | WW | 197 | 217 | 3.9e-11 | 42.5 | 4.5e-06 | 0.067 | 13.0 |
Transcript
Transcript ID | pfu_aug1.0_253.1_00212.t1 |
---|---|
Definition | - |
>pfu_aug1.0_253.1_00212.t1 atgccgctacgccacggtgacaaccctaaaaacaagtctttcaccgtgacgtcgcggtatgagcggcctgctttgtatgc taggcgaagccgccgtacggagtttaccgacttttcatattttagttcatctgtcaatcgtcttgctggtgaagactcgg acctctatgcaaatgttacacagcttgataaccagaaggatgagaggacgcaggcgagtcagaaccgagacgaccgagat ttactccctggcgacacaccgggaacttacatgagaactctactagatgtatgggatatgtacctcgacaaagattcgaa cagaatctattatataaacagggaaacgcaagaacgaaccttcaaaccccctcgtcatcccaataaggcggaacagttca agcatttggaacaaaagccggtggcggtacccagcgttacagaacagagaaagcggagtgcaccacagctgaaatttcca catgaattaagtagtgccaacattccagacggctatgtggtagaggagacggatggaagaactctctatatcaaccctaa taccaatgaaaggtggtgttcaaatgtaaatacagatggagaaaaatattattataagattggcacagaagaaactgtat gggaccttccaaaggtatctgacgtcaacgcattgtga |
Protein
Protein ID | pfu_aug1.0_253.1_00212.t1 |
---|---|
Definition | - |
>pfu_aug1.0_253.1_00212.t1 MPLRHGDNPKNKSFTVTSRYERPALYARRSRRTEFTDFSYFSSSVNRLAGEDSDLYANVTQLDNQKDERTQASQNRDDRD LLPGDTPGTYMRTLLDVWDMYLDKDSNRIYYINRETQERTFKPPRHPNKAEQFKHLEQKPVAVPSVTEQRKRSAPQLKFP HELSSANIPDGYVVEETDGRTLYINPNTNERWCSNVNTDGEKYYYKIGTEETVWDLPKVSDVNAL |