Gene
| Gene Model ID | pfu_aug1.0_2535.1_23007 |
|---|---|
| Locus | scaffold2535.1 : 1 ... 28035 : - |
| To GenomeBrowser | scaffold2535.1:1..28035 |
| Genes list of scaffold | scaffold2535.1 |
| Synonym | pfu_aug2.0_10412.1_09768 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2535.1_23007.t1 | 21 | 1 | Cadherin | 14 | 59 | 0.0 | 540.1 | 5.9e-09 | 8.8e-05 | 22.6 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 2 | Cadherin | 117 | 191 | 0.0 | 540.1 | 0.00014 | 2.0 | 8.7 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 3 | Cadherin | 194 | 252 | 0.0 | 540.1 | 1.7e-06 | 0.026 | 14.7 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 4 | Cadherin | 279 | 365 | 0.0 | 540.1 | 1.6e-09 | 2.4e-05 | 24.5 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 5 | Cadherin | 381 | 432 | 0.0 | 540.1 | 6.2e-05 | 0.93 | 9.7 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 6 | Cadherin | 465 | 552 | 0.0 | 540.1 | 4.9e-16 | 7.3e-12 | 45.3 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 7 | Cadherin | 574 | 628 | 0.0 | 540.1 | 3.0e-10 | 4.4e-06 | 26.8 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 8 | Cadherin | 642 | 731 | 0.0 | 540.1 | 1.6e-14 | 2.4e-10 | 40.5 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 9 | Cadherin | 753 | 841 | 0.0 | 540.1 | 3.2e-10 | 4.7e-06 | 26.7 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 10 | Cadherin | 860 | 947 | 0.0 | 540.1 | 2.7e-19 | 3.9e-15 | 55.8 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 11 | Cadherin | 981 | 1058 | 0.0 | 540.1 | 1.9e-12 | 2.9e-08 | 33.8 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 12 | Cadherin | 1073 | 1169 | 0.0 | 540.1 | 2.4e-13 | 3.6e-09 | 36.7 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 13 | Cadherin | 1192 | 1241 | 0.0 | 540.1 | 8.3e-08 | 0.0012 | 19.0 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 14 | Cadherin | 1296 | 1321 | 0.0 | 540.1 | 0.0079 | 120.0 | 3.0 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 15 | Cadherin | 1342 | 1434 | 0.0 | 540.1 | 4.5e-10 | 6.6e-06 | 26.2 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 16 | Cadherin | 1448 | 1540 | 0.0 | 540.1 | 3.3e-11 | 4.9e-07 | 29.9 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 17 | Cadherin | 1556 | 1645 | 0.0 | 540.1 | 3.4e-16 | 5.0e-12 | 45.9 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 18 | Cadherin | 1660 | 1716 | 0.0 | 540.1 | 3.7e-09 | 5.5e-05 | 23.3 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 19 | Cadherin | 1730 | 1817 | 0.0 | 540.1 | 1.5e-11 | 2.2e-07 | 31.0 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 20 | Cadherin | 1847 | 1935 | 0.0 | 540.1 | 4.5e-14 | 6.7e-10 | 39.0 |
| pfu_aug1.0_2535.1_23007.t1 | 21 | 21 | Cadherin | 1948 | 2016 | 0.0 | 540.1 | 1.2e-12 | 1.8e-08 | 34.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2535.1_23007.t1 | gi|297461475|ref|XP_001249786.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2535.1_23007.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2535.1_23007.t1 atgaatgatgggtcctcattgttttcggttccagtagcaagaactggaacagtggtcgtgacaaatccgttggactttga gtctgttacgtcatatatcctaaatgtatctgcaacagatcaagctgcagtagtatcagataggcgaacagtttatacca ctttgacagtaggagtgactgatgccgacgatctaccaccccagtttgttattccgaactgcatcacatcaaccaacaat cctttagtaccttcagcttgttttaatccaacgtacaggacgactctaacgtctggtgccgtaacttcagggcctttagt tatgaccccagtttctgtgactgtatccaatccccctacaactgacattatagcccgtgatagcgatactctaaatgcag ttcttgagttttacattgagccgacgggttcaccttcatatgcaaatttcttcagcatttccactacgtcacttggtaat ggacagtatcgggcatcagttactcaaacaaatagtattgatcgcagcactgtggaaaactttgatctcattgtcaaggt tgcaggagaagaccaaagctacacttacacagtgacagggacctccctctttacagttaacaatgatggttacgttgtac tgaacacacccaacttaaactacgaaacaactcctacggttatattcactgtaactgtaacagaggtcggaacaactaat cctcgcagtacgtccacacaggtcactatcattgttagagacctaaacgacaacaaccctgtgttcctgtcaccatccta ctccgatacagtaccggagggaaactataccaacgacaatcaagttctattggatgtgtcagctacagatgcggacacag gtgtcaatggtgatcttgtatacaccattcagagcgtgtcaaatggaggtaccggcatcttcaacattataccggcaaca tctggcaccggtgccacactgcgtattaacggaaatgtggtagaaaaccaagtatttgttataacagtactggctacaga tcaagctgccgttcctgctcagaggcgctctactgccgttcctgtcgaaataacagtaacacctcttggaactaaggacc cagtgattcctgccgatacatacaatattgctgtcagtgagggtgttcctgtagggacatcagtcttctctgtacctgca acagatcctgaaggtcaagctttgaccttcacattcctctctgctgttacggatttctccattagtcagactacagacaa tgtttacatttatatgtattctaaacaatctttattccagtcggaccaaacaactttgaatattcaaattttggacgtca acgacaacaacccgttgtttacgcagtcttcctacacattcgctgttaatgaaggacaagcaaacttaccagttggaact gttacggcaattgatgcagaccttgtggatcaaatcacgtatgaatttttgacaggagatttcaccgctttcagtctggc tcagtcaggagttatcacaactaatacagccttggattatgagaccaagaatcagtacatcttccaaattacgaccagcg agggacgcagctcaggcctcctttcttcaactgttactgtcactatcaatgttcagggcacaccaaatagcgctattgta ttcactcgaggaactgtcacagccacacccaacactgcaaacaaccacgcccagttattttatgttagtccgaccaatgg acagataactcttacccgaccttttacaacagatagcacacctacacagtatagcctgaccataaacgtccaagattctg gagttccagcacgggccacttctgccaccattagaattaatgttataaggaataatgctccaacattcgtgcctgccacg cagacagtagatatcgataataatctaggtgttccatctccaatcattacattttctgccactgatgccgacacgaggcc tgagtttatcatgggaacctattctctgatacccgatactcgcttcccggccggattttccctgaatacaaatactggag caataaccttggcaacatctctcctgactgacacctctagccagtacatactaaccgtaatagctactgatttgggaggt ttgactgctaccggtactgtgaccataaatgtggacagaaatctacaaacacctcaatgggtacctaacacaggaccttt ctctaccgtactcgatgttattgaaaaccgaccagtacaagatattataatcactctcaatgcccaggacttggatcaac agtctccaggaaaccagctagcatttactttgaacggcgattctagagcacttcagtacctgcagatcgataacagcgga aacttaaggttgattcgctcccttgcctcggacagatcttttaaccagtttgtggctacagtcagcatatctgatcaagg tgttccaccacgagctcagccccagacgtacactgtgaccatcaatgtcatcaggaataatgctgatccattattcttca gccagtcgtattaccaggaaattaacgagaacgtacccattggtacaactgtactgagagttaatgccactgatacagat cccaattttggtctcatcacctactccttgatagctcagcaagctggagataacctgttccagatcaaccccggcacggg cgatattaccaccagagttctgctcagtactgaccccaccgtcactcatacgatggttgccatagcgacagacaatggga gtccttccagaactgccacagcatttgttacgataaaagtgattaagaactttaatccacctgtttggaccaggacaagt taccaagttaatatcttagaaatccaagatctaggcgtcgctctcacattgagtccttcaacgctattagccggggtaca agataacgataacactgcgcctaacaacgaaatcaactttagactcttgggtaccgctcttggtcaacaatttttccaaa tttctccaacaggagaagtcagtgtgcagaggtcattaactaccggcacagcttcaagctatcagcttcaagttcaagcg tatgatttgggagatccctccaggacaagtgtacaaactgccatagtgacggtgaacgtacagcgtaaccgcgcaccagt attcacgtcccaaacctacaccacaacaatacccgaggtccaaggtacaggatcatcagtgtttcaagtcgtggcctccg atcctgatgttgggactccacagttttccacccttacatacttcatcgacggattgggcaccggtccttcatatttcacc ataaattccgcgactggagagatatcattagggaatgtggctttgaccaccatcagtgatactgtcttccagctccgagt tcaagtatcggatcaagggaatccatcgttgctctcacagcaaacggccactgttaccataaatatcgagcgaaattcac ttgctccagtcttcctgaatcttccagctaccaccccactgtcaagaacagccactttcggctcacctgtttacgatgtt gatgcaagagatgatgatcctaatgctcctttcaaccaaattagatataatatcctatctggaaccaacattaccagctt tacaatgaatgaaaatactggtgcaattacgctgaatacaaataatctagccttagcagaatataggtttctggtcactt gtgattttaattctatgatcattcattggtactacatacatgtacatgtatatcaaacacttgtttctccagaaatctgt tttgataggcttgatagggcatttttgaagccatatgaaaaattcaattttcagttgacgatcagagctgccgacagagg tacccctagcagacaagccttctctgacctgatcataacagtcgacaataacctctttgatccagtgttcaccagaccga acgccacctccaattttgctgactcagtaaccatacctgagactcaggacttcacttccccgatctacgactttgatgcc cttgattcagatccagggattccgttcaatagcgttgatttcgttctcgaaggcagcactgaagcacagagcttcttcac agtgggaagtaatggtcaagttttccttaagtcatctctgctacagacaacaaccaatcaatttgtgttgactgttcgag ctgaggatggtggaagtcctcctagagtggcagccaacaaaggaacattgacagtaaacgtcatcagaaacaacaatgct ccgcagtggcaaaacctcccatatgctgccacaatatctcagcagagtgccgtcaataatccagttctaaatgtttttgc cacggattctgacatgatttttaaccaagtgagatatgaaataatcggggacggcagtgctccagcttatttccaaatca gcaatcctctctccggtcagattacagtagcctcatccctcaccactacgcctgatctgaccttctatgtgcgagtaaga gcatacgacaacggacaaccggcaaaagataatgacacggtagtgaccatcacaatccagaggaaccaattcgctccact gataccagcgtcaaataccttaataaatgttcgaattcccgaaactcagcaactcggaatcccaataacaagtgtaaatg ctacagattctgatccacagccgccacataacacgatcatgtacgagatgtatggagctgctttacctttggagtacttt atactaaatcctgacaatggagatatatcggtgcggaaatcgttgatgctggatctggcgaatacacagacatatgaggt gcaagtatcagcctacgatttaggatcccctagcttacggtctaacgctaatgctacaaatccatataatgtagtgtccc tgcaggtcatcggtgacgataaagccacgacttactttgaaattgaacaattggcaaacactgccaacgtcaaagttaga gctgacctcaccactgattctgatacattctatactctgagggtgattgcccaagatggaggttcccctcggctcagtgc cactgccacagtagccataactgtcctcagaaatctcttcgctcctgttttcagtcccgtttcatataaccagaccatat tggaaactcagtcacttggcgtcactattctctctgtcaatgccactgatgacgaccgactgagtccccatagagatgtg cgatattccataagtcaagaccaggctagtgcactgggaagaacatacttcatggtagactctgttactggagctataag tctacgagtttctccgatggaggacaacagtagaaccatttcttacaatttccaagttaatgcagtggatcttggggtcc ctacggccaggggagctcaaattccggcatctgtaagaatcgacgtaatcaggaactccaacactccacaaattaccaat ctaccaaccacccgcaatatcaatcacaatacaactgccggaacggaaatcatcgatgttgatgccactgacattgacca gggtatcttcggtcagcttacatggtcaatcaccggagacgataattccccggccatttttgctatcaatccttcaacag gatcgttgactctacagcagaatatattcagtcttacaaccacgacatatcaagtgagagtacgtgtacaggacggaggc tctccggttctctcggacacagagctgctaactgtcactgtgcagaggaacttcaaccccccggtgtttgtacagaatag ctatacaggaactgttcgtgaggatagacctattggattcacattcctaaccgttcaagccatagatgctgattcttcag cccccaacaacataccaagatattacttcagtgatgccactccgtccacacgtttcttgttgaacgaggcaacaggtgcc atagaagtccgaagggatctcaccggagagacacaggaacaatatgtg |
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Protein
| Protein ID | pfu_aug1.0_2535.1_23007.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2535.1_23007.t1 MNDGSSLFSVPVARTGTVVVTNPLDFESVTSYILNVSATDQAAVVSDRRTVYTTLTVGVTDADDLPPQFVIPNCITSTNN PLVPSACFNPTYRTTLTSGAVTSGPLVMTPVSVTVSNPPTTDIIARDSDTLNAVLEFYIEPTGSPSYANFFSISTTSLGN GQYRASVTQTNSIDRSTVENFDLIVKVAGEDQSYTYTVTGTSLFTVNNDGYVVLNTPNLNYETTPTVIFTVTVTEVGTTN PRSTSTQVTIIVRDLNDNNPVFLSPSYSDTVPEGNYTNDNQVLLDVSATDADTGVNGDLVYTIQSVSNGGTGIFNIIPAT SGTGATLRINGNVVENQVFVITVLATDQAAVPAQRRSTAVPVEITVTPLGTKDPVIPADTYNIAVSEGVPVGTSVFSVPA TDPEGQALTFTFLSAVTDFSISQTTDNVYIYMYSKQSLFQSDQTTLNIQILDVNDNNPLFTQSSYTFAVNEGQANLPVGT VTAIDADLVDQITYEFLTGDFTAFSLAQSGVITTNTALDYETKNQYIFQITTSEGRSSGLLSSTVTVTINVQGTPNSAIV FTRGTVTATPNTANNHAQLFYVSPTNGQITLTRPFTTDSTPTQYSLTINVQDSGVPARATSATIRINVIRNNAPTFVPAT QTVDIDNNLGVPSPIITFSATDADTRPEFIMGTYSLIPDTRFPAGFSLNTNTGAITLATSLLTDTSSQYILTVIATDLGG LTATGTVTINVDRNLQTPQWVPNTGPFSTVLDVIENRPVQDIIITLNAQDLDQQSPGNQLAFTLNGDSRALQYLQIDNSG NLRLIRSLASDRSFNQFVATVSISDQGVPPRAQPQTYTVTINVIRNNADPLFFSQSYYQEINENVPIGTTVLRVNATDTD PNFGLITYSLIAQQAGDNLFQINPGTGDITTRVLLSTDPTVTHTMVAIATDNGSPSRTATAFVTIKVIKNFNPPVWTRTS YQVNILEIQDLGVALTLSPSTLLAGVQDNDNTAPNNEINFRLLGTALGQQFFQISPTGEVSVQRSLTTGTASSYQLQVQA YDLGDPSRTSVQTAIVTVNVQRNRAPVFTSQTYTTTIPEVQGTGSSVFQVVASDPDVGTPQFSTLTYFIDGLGTGPSYFT INSATGEISLGNVALTTISDTVFQLRVQVSDQGNPSLLSQQTATVTINIERNSLAPVFLNLPATTPLSRTATFGSPVYDV DARDDDPNAPFNQIRYNILSGTNITSFTMNENTGAITLNTNNLALAEYRFLVTCDFNSMIIHWYYIHVHVYQTLVSPEIC FDRLDRAFLKPYEKFNFQLTIRAADRGTPSRQAFSDLIITVDNNLFDPVFTRPNATSNFADSVTIPETQDFTSPIYDFDA LDSDPGIPFNSVDFVLEGSTEAQSFFTVGSNGQVFLKSSLLQTTTNQFVLTVRAEDGGSPPRVAANKGTLTVNVIRNNNA PQWQNLPYAATISQQSAVNNPVLNVFATDSDMIFNQVRYEIIGDGSAPAYFQISNPLSGQITVASSLTTTPDLTFYVRVR AYDNGQPAKDNDTVVTITIQRNQFAPLIPASNTLINVRIPETQQLGIPITSVNATDSDPQPPHNTIMYEMYGAALPLEYF ILNPDNGDISVRKSLMLDLANTQTYEVQVSAYDLGSPSLRSNANATNPYNVVSLQVIGDDKATTYFEIEQLANTANVKVR ADLTTDSDTFYTLRVIAQDGGSPRLSATATVAITVLRNLFAPVFSPVSYNQTILETQSLGVTILSVNATDDDRLSPHRDV RYSISQDQASALGRTYFMVDSVTGAISLRVSPMEDNSRTISYNFQVNAVDLGVPTARGAQIPASVRIDVIRNSNTPQITN LPTTRNINHNTTAGTEIIDVDATDIDQGIFGQLTWSITGDDNSPAIFAINPSTGSLTLQQNIFSLTTTTYQVRVRVQDGG SPVLSDTELLTVTVQRNFNPPVFVQNSYTGTVREDRPIGFTFLTVQAIDADSSAPNNIPRYYFSDATPSTRFLLNEATGA IEVRRDLTGETQEQYV |
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