Gene
| Gene Model ID | pfu_aug1.0_25354.1_40556 |
|---|---|
| Locus | scaffold25354.1 : 24 ... 14545 : - |
| To GenomeBrowser | scaffold25354.1:24..14545 |
| Genes list of scaffold | scaffold25354.1 |
| Synonym | pfu_aug2.0_646.1_21020 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25354.1_40556.t1 | 3 | 1 | DUF3535 | 101 | 147 | 6.8e-26 | 90.8 | 1.1e-11 | 1.7e-07 | 30.2 |
| pfu_aug1.0_25354.1_40556.t1 | 3 | 2 | DUF3535 | 157 | 254 | 6.8e-26 | 90.8 | 1.9e-20 | 2.8e-16 | 59.2 |
| pfu_aug1.0_25354.1_40556.t1 | 3 | 3 | DUF3535 | 277 | 298 | 6.8e-26 | 90.8 | 0.21 | 3100.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25354.1_40556.t1 | gi|321475222|gb|EFX86185.1| | hypothetical protein DAPPUDRAFT_313238 [Daphnia pulex] | 9.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_25354.1_40556.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25354.1_40556.t1 acacctgtactggttacaatggtgaatccccagtaagattactgttctctcaattcgacatcggcaaagttcttaatcac agtgcatcattgctaggatcagaggaaaagcagtatgaatcggatgttcaaagtctagataacaaggagttactgagtca tcagcgacagcttctgaacaggagactagggttagacatggctggtaacctgaagctgggaatagagggcgacatattta cagaggaagatttagtgatcggaataaaaaaagaaaacgggtcctcatctgaaacaaaggattccatatgtccgaaggaa gtgaaaacaaaactaatggactgtctgaatgaagcaatatattttgatgagatagcaatatcgttcacacaaatgcagtc agactgcaaggatttcttagctggattaagacaacatggcattgatctagagtcagttattccttcaaggaaatgtttag acagaaatgacagttccaatgccaaggtacttggtaatctgtgtaccttcctttgtggtgatactcaacagacccccatc atttcacagcctacaccagtacattgcgttgatgaatcagacataaagtgtgatgaatgcctggggattataacactctc cagacaacagaagagtcagagacagttgctgatccagaggagaggtgctgagttcgctttgtcagagattaccaagaact tcagtcaagatttgtcgtccagtcttccattactctgggaccatattcaagctccactgttctctttagaatcaggtgga aatgaggaactaagcacagctcaaggtcaagagttggtcaattccttacaagtattagaaacagtgtgtcctgtattaca ttcctccttattaaagaaggtaattaagagatttttcattatgcagaactttgaataa |
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Protein
| Protein ID | pfu_aug1.0_25354.1_40556.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25354.1_40556.t1 TCTGYNGESPVRLLFSQFDIGKVLNHSASLLGSEEKQYESDVQSLDNKELLSHQRQLLNRRLGLDMAGNLKLGIEGDIFT EEDLVIGIKKENGSSSETKDSICPKEVKTKLMDCLNEAIYFDEIAISFTQMQSDCKDFLAGLRQHGIDLESVIPSRKCLD RNDSSNAKVLGNLCTFLCGDTQQTPIISQPTPVHCVDESDIKCDECLGIITLSRQQKSQRQLLIQRRGAEFALSEITKNF SQDLSSSLPLLWDHIQAPLFSLESGGNEELSTAQGQELVNSLQVLETVCPVLHSSLLKKVIKRFFIMQNFE |
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