Gene
| Gene Model ID | pfu_aug1.0_25379.1_55059 |
|---|---|
| Locus | scaffold25379.1 : 20368 ... 26927 : - |
| To GenomeBrowser | scaffold25379.1:20368..26927 |
| Genes list of scaffold | scaffold25379.1 |
| Synonym | pfu_aug2.0_816.1_21187 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25379.1_55059.t1 | 1 | 1 | p450 | 3 | 87 | 2.5e-23 | 82.3 | 1.7e-27 | 2.6e-23 | 82.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25379.1_55059.t1 | gi|260791627|ref|XP_002590830.1| | hypothetical protein BRAFLDRAFT_90034 [Branchiostoma floridae] | 7.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_25379.1_55059.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25379.1_55059.t1 agggccatcgcagacgacagcttcaaaggatatttcatccccaaaggaaccgtcgttggactccatataggtgcattgca cagactaaactgggaggacggagatgaattcatacctgaaagatttctagactcgggttcagtggatggaacactgtatg tgccgtttgggttcggaccttatatgtgcatcggacacaaattttccatgttggaaatgaaaacaattttatccattctt atatcaaaatttgtctttgatanttga |
|
Protein
| Protein ID | pfu_aug1.0_25379.1_55059.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25379.1_55059.t1 RAIADDSFKGYFIPKGTVVGLHIGALHRLNWEDGDEFIPERFLDSGSVDGTLYVPFGFGPYMCIGHKFSMLEMKTILSIL ISKFVFDX |
|