Gene
| Gene Model ID | pfu_aug1.0_2538.1_23010 |
|---|---|
| Locus | scaffold2538.1 : 6786 ... 21332 : + |
| To GenomeBrowser | scaffold2538.1:6786..21332 |
| Genes list of scaffold | scaffold2538.1 |
| Synonym | pfu_aug2.0_3973.1_12558 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2538.1_23010.t1 | 1 | 1 | Laminin_G_2 | 59 | 154 | 3.5e-13 | 49.7 | 7.7e-17 | 5.7e-13 | 49.0 |
| pfu_aug1.0_2538.1_23010.t1 | 1 | 1 | Laminin_G_1 | 60 | 137 | 1.8e-10 | 40.9 | 3.3e-14 | 2.5e-10 | 40.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2538.1_23010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2538.1_23010.t1 atgacgtacggacggactatatttgcacgaaccattccagagcattgttcttctaccatcaacatactgacagagaatgg agtttatattgaaccaatgtctggcagtttggtcaagatggccgccttaagtaaaacctttgtcaacgggcacattttgt catttgacgtaaatatgacgtcatcagatggcgttgtgttttacctgctaggtcaaggtcgaagaaggtcagagttcatc gccttggaggtagccaatggtcacttccggtatcatataaaatgcggatatctggacgctttactaaccatcacagatat aagggctaatgaccgcaaatggcacacgattcagtttttccgacgatctacgaggggtaatctaaaagtagacggcaaac gttattttcaccattatcccgtacattgccgaggacttcatacgctggtgtttggcggtgtcagtcccgaacatcgccga gcggtacacacgatacggaaagtcagttcacgacgcgtcgtagtcggtcgatgccgcgtcacatcagacgaaagaaaaga gaaactctgtagaaagacgcagtgtttagatgtcaatagttcaaatatcaatattcacgacgatgatttgatttgccaat gtcatttatctgcaacatctttttgtgcaaacatgtatccatag |
|
Protein
| Protein ID | pfu_aug1.0_2538.1_23010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2538.1_23010.t1 MTYGRTIFARTIPEHCSSTINILTENGVYIEPMSGSLVKMAALSKTFVNGHILSFDVNMTSSDGVVFYLLGQGRRRSEFI ALEVANGHFRYHIKCGYLDALLTITDIRANDRKWHTIQFFRRSTRGNLKVDGKRYFHHYPVHCRGLHTLVFGGVSPEHRR AVHTIRKVSSRRVVVGRCRVTSDERKEKLCRKTQCLDVNSSNINIHDDDLICQCHLSATSFCANMYP |
|