Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2538.1_23011
Locus scaffold2538.1 : 21535 ... 24115 : -
To GenomeBrowser scaffold2538.1:21535..24115
Genes list of scaffold scaffold2538.1
Synonym pfu_aug2.0_184.1_13746

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2538.1_23011.t1 1 1 Mab-21 163 221 1.5e-08 34.1 2.0e-12 3.0e-08 33.1

Transcript
Transcript IDpfu_aug1.0_2538.1_23011.t1
Definition-
>pfu_aug1.0_2538.1_23011.t1
atggcggcgtcttcagaacagactgagatatctctgatatcgagaggatcatatagacttgttagtgatgtaataggacc
ggaatgtcatgtcaaactacggagaaatcgatatgaactttttgatcgcctcttgaattgtgatacaaatagcgaaagta
cacgcattacaggtggcagtacagtagaaggatttgaattcatgtcatctgatttcgactttatattcgtcaacagagaa
gtctcagttgttaccaattctatcctctcatacaatcacaacttgacatttcccattttatttgttatggaaagtgaaga
gtgttatcctggatatacactactgcgttgtctgaaatgcgtcagttggaatatcctactttgcaatgctttagttttga
aagctaacaatttatatgttagcggtaaagttataaaagaaacatttatgcctcatagttttgcacaagagcacgggcct
tgcaaatcatttaaacattatatcgagattgacatggcatatactttgaggtgtcctgtctggcctactcaggctatgtc
gtttgtcacccgatctattgagagaggttggccatcatatcaagttcttaaagatgtaatgaatgatggttgtcttcttg
tcccaatcagtagtaaacagcagacgtgtagtgacctgccgtacatgtacatctgggatatggatgatgatatcatcaag
gaaacaagacaacaaggaatgccgtatgatatcttgatcaaatcatttatattggataccgtgaaggttgattcctttac
atcaatggagcaactacagttagaatgtcacgccaaagttcgtcttacaagactagattatttgaatattcccctgtttg
tgcatattgacttcctgctttttctcagttattccagccttgaggagaatcagagacgatatgccatattggaagaacta
catgatctagtctactatgataatggatatcatattcataactatcataaggcaatatcatgggagatactaggaatctg
tcagcagatctgtggtgactgtcagggtgccctcaagtcatatagaaatgcattaaacgaggaagagaatttctttaaag
aagcgacattaactcgcatccaaagtctcttcatccaatcataa

Protein
Protein IDpfu_aug1.0_2538.1_23011.t1
Definition-
>pfu_aug1.0_2538.1_23011.t1
MAASSEQTEISLISRGSYRLVSDVIGPECHVKLRRNRYELFDRLLNCDTNSESTRITGGSTVEGFEFMSSDFDFIFVNRE
VSVVTNSILSYNHNLTFPILFVMESEECYPGYTLLRCLKCVSWNILLCNALVLKANNLYVSGKVIKETFMPHSFAQEHGP
CKSFKHYIEIDMAYTLRCPVWPTQAMSFVTRSIERGWPSYQVLKDVMNDGCLLVPISSKQQTCSDLPYMYIWDMDDDIIK
ETRQQGMPYDILIKSFILDTVKVDSFTSMEQLQLECHAKVRLTRLDYLNIPLFVHIDFLLFLSYSSLEENQRRYAILEEL
HDLVYYDNGYHIHNYHKAISWEILGICQQICGDCQGALKSYRNALNEEENFFKEATLTRIQSLFIQS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495