Gene
| Gene Model ID | pfu_aug1.0_25408.1_47732 |
|---|---|
| Locus | scaffold25408.1 : 166 ... 16253 : + |
| To GenomeBrowser | scaffold25408.1:166..16253 |
| Genes list of scaffold | scaffold25408.1 |
| Synonym | pfu_aug2.0_631.1_04422 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25408.1_47732.t1 | 1 | 1 | Adap_comp_sub | 58 | 280 | 1.3e-25 | 89.9 | 1.2e-29 | 1.8e-25 | 89.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25408.1_47732.t1 | gi|291223145|ref|XP_002731573.1| | PREDICTED: AP-5 complex subunit mu-1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_25408.1_47732.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25408.1_47732.t1 atggcagactacctacgactgatgaatccaaaggagatagaaagtagaataagtgagatgtacctgtacttgaacatagc cgcaccttttggttgtcctttggatgtcaacagtgatacagttacggcaaaaatgtacaataaacctagctaccttccaa aaactaataagtacagtagggagaatgtaccggacacatgggacttatatggtactgtatcgtgtaaagctgacctagag ggcgctgtaccagatataacgatcaacatctcacacacaccagagggcgcttcactgcccctggaccacctgatgatcca tccctgtgtacaaagtgccgactcggctgtcattgacccctcagaagtaaaggcggcaccaagacgagtacgatttactc cccctgcagagatgtttgcactttgccactacacagtgtcatctttaaaacaactaccaattacagctatatatgacatg aagatgtctggtagaatagcgacactgaaggttcagctgaccttgacacagggtattaggaatacgtttgagtactgtga actacagatgccattttacaatcgaggtacaataaccaaccatgaatctacagccagtcagggtaatgtaattacgtcac ctgataaacgtatactggtatggaatgtaggtctaaaatttcctcccaagtcccattctgccagcctggaatccacagtg accttcacagaggtcaaacatactgacctgtatgaggatccattctgcatcaatcaaaacgcctacgcacagttattttt caagataagtgacttcactcagtctggatgttacattgacccaaagtctacccaggtgtcaccaaacaccaagtttaaac tcacaacagcaatcaacatggaggggtctcatacacagtcctcggcgccaaagtcctacgtagaacgtgccgtcatggct ccagttagacgccgctacccccaggatctgtaa |
|
Protein
| Protein ID | pfu_aug1.0_25408.1_47732.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25408.1_47732.t1 MADYLRLMNPKEIESRISEMYLYLNIAAPFGCPLDVNSDTVTAKMYNKPSYLPKTNKYSRENVPDTWDLYGTVSCKADLE GAVPDITINISHTPEGASLPLDHLMIHPCVQSADSAVIDPSEVKAAPRRVRFTPPAEMFALCHYTVSSLKQLPITAIYDM KMSGRIATLKVQLTLTQGIRNTFEYCELQMPFYNRGTITNHESTASQGNVITSPDKRILVWNVGLKFPPKSHSASLESTV TFTEVKHTDLYEDPFCINQNAYAQLFFKISDFTQSGCYIDPKSTQVSPNTKFKLTTAINMEGSHTQSSAPKSYVERAVMA PVRRRYPQDL |
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