Gene
| Gene Model ID | pfu_aug1.0_25425.1_19077 |
|---|---|
| Locus | scaffold25425.1 : 1896 ... 12562 : + |
| To GenomeBrowser | scaffold25425.1:1896..12562 |
| Genes list of scaffold | scaffold25425.1 |
| Synonym | pfu_aug2.0_4957.1_26016 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25425.1_19077.t1 | 1 | 1 | Gal-bind_lectin | 51 | 173 | 2.5e-32 | 111.0 | 1.9e-36 | 2.9e-32 | 110.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25425.1_19077.t1 | gi|209733430|gb|ACI67584.1| | Galectin-9 [Salmo salar] | 5.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_25425.1_19077.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25425.1_19077.t1 atgatcctccaggtggatacggacacggatacggaaatatgggaggatatgtgggatgcccccgaaggaccgggaggcac ttatggacagccacacggaccacctcccggccatcatagatatggaggtccaggcggtgaagttcaattaccatacaaaa attctatatctggtggtgtgaaaactggacgaaggatcaagatttctggacgtcttacgggcaattatttttacgtgaat ttggcggatcccggccccagtaatgatatcggatttcatttcaacccaaggctcaataaaaatgctgttataaggaacag catgttaggtggaaaatggggacgtgaggagaggggaggcggcatgccattccatcgtggacaacatttttccatgggga tacaagttttggacagggaatacagggtcatggttaacaacaatcacttctgcagttttaatttccgaggacaacccggt aaatatagcgaattgcaggtcggtggaggtctagccaatgtccaaattaattttcagtga |
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Protein
| Protein ID | pfu_aug1.0_25425.1_19077.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25425.1_19077.t1 MILQVDTDTDTEIWEDMWDAPEGPGGTYGQPHGPPPGHHRYGGPGGEVQLPYKNSISGGVKTGRRIKISGRLTGNYFYVN LADPGPSNDIGFHFNPRLNKNAVIRNSMLGGKWGREERGGGMPFHRGQHFSMGIQVLDREYRVMVNNNHFCSFNFRGQPG KYSELQVGGGLANVQINFQ |
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