Gene
| Gene Model ID | pfu_aug1.0_25560.1_55080 |
|---|---|
| Locus | scaffold25560.1 : 1 ... 14335 : - |
| To GenomeBrowser | scaffold25560.1:1..14335 |
| Genes list of scaffold | scaffold25560.1 |
| Synonym | pfu_aug2.0_360.1_00648 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25560.1_55080.t1 | 2 | 1 | ABC_membrane | 115 | 136 | 6.9e-25 | 87.9 | 0.19 | 1400.0 | -1.7 |
| pfu_aug1.0_25560.1_55080.t1 | 2 | 2 | ABC_membrane | 230 | 431 | 6.9e-25 | 87.9 | 9.3e-29 | 6.9e-25 | 87.9 |
| pfu_aug1.0_25560.1_55080.t1 | 1 | 1 | ABC_tran | 419 | 450 | 1.8e-06 | 28.3 | 4.5e-10 | 3.4e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25560.1_55080.t1 | gi|293339900|ref|XP_002724532.1| | 8.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_25560.1_55080.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25560.1_55080.t1 atgagtatttcgaatcctacaaattcatcatcttttgaccagttttgtggtcattccgaattgtggaatgatgacgtgtt atcgggagatgctccagcgttcacgccctgtttccaagacacggtcctggtgtatgtaccctttggatggctcctggtct ccttgcctttctattttccatatctctacaagaaacctccgggattcagtcttccgttgacagcttttagtgttaccaaa tcagtcaaagtctgggcccatgacacatacgggtatctttgtcagtccgatgacgtcccgatctcatattatgtaggagt agtcgttcgtagtatattttacccgtcctgtaccagcagcattatctactacatttattttgccgtcatctcactacaat gtattctccattcatttgccgacaaagtccagaaaccaggttatcaacttcttggacagatccagtactatatatcttca ttgaaaagggccgaaaagaagagtcaatcagtaaagtatgaaaagcatatgcacaccaacggaagaccaaacggggatat gatgaatgaaaaagaacctttattgtccaaatcggaatcggcggaattctaccagaaagagcgtacaaagcctatcaaac catctctatacagagttcttattcgtacttattggaaacaatggttcttctcgtccttcctcaagattatagacgacatt tttgctcttggtcaaccattcattttgaaatacatcatcgatattattgagaccaaaaaaccagacgaatctcctgattg gagaggatacacattggctatcctatttttcttggctgggatggggacaacgattttctacagtcagtctgcctacgtca tgatgagattgggtttacaaatgaaaactgctgtcattggtatcatttacaaaaaggcgctgaccatgagcaatgcctcc aagaagaattactccgtaggtgacatagtcaatttgatgtccgtggactgtcagaggttacaagacgcttttcaatttca atatgaaatcgtctcctttttcgtcatgatagctttaggactgtacctgatttggatagagatgggcttgtccaccgtgg gaagtctggttgtaatcgtggtggtggcaattattcaaatatggtttggcaaacttcaagaagtgtaccaaatcatcatt ctaaagttgaaaagtagccgaatcagacttttgaaggaggttttaaacggcattaaggggatcaatgtcagcggaggtca gaaacagcgtattagcttagccagagctgtctataacaactgtgacgtatacttcctggatgatcctttgtcagctgttg atagtcacgtaggcaaggacctgttcagaaatgtcattggcaacactgggcttctgaaacataag |
|
Protein
| Protein ID | pfu_aug1.0_25560.1_55080.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25560.1_55080.t1 MSISNPTNSSSFDQFCGHSELWNDDVLSGDAPAFTPCFQDTVLVYVPFGWLLVSLPFYFPYLYKKPPGFSLPLTAFSVTK SVKVWAHDTYGYLCQSDDVPISYYVGVVVRSIFYPSCTSSIIYYIYFAVISLQCILHSFADKVQKPGYQLLGQIQYYISS LKRAEKKSQSVKYEKHMHTNGRPNGDMMNEKEPLLSKSESAEFYQKERTKPIKPSLYRVLIRTYWKQWFFSSFLKIIDDI FALGQPFILKYIIDIIETKKPDESPDWRGYTLAILFFLAGMGTTIFYSQSAYVMMRLGLQMKTAVIGIIYKKALTMSNAS KKNYSVGDIVNLMSVDCQRLQDAFQFQYEIVSFFVMIALGLYLIWIEMGLSTVGSLVVIVVVAIIQIWFGKLQEVYQIII LKLKSSRIRLLKEVLNGIKGINVSGGQKQRISLARAVYNNCDVYFLDDPLSAVDSHVGKDLFRNVIGNTGLLKHK |
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