Gene
| Gene Model ID | pfu_aug1.0_25581.1_69720 |
|---|---|
| Locus | scaffold25581.1 : 1 ... 6945 : - |
| To GenomeBrowser | scaffold25581.1:1..6945 |
| Genes list of scaffold | scaffold25581.1 |
| Synonym | pfu_aug2.0_381.1_04079 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25581.1_69720.t1 | 1 | 1 | Fibrinogen_C | 132 | 262 | 4.9e-30 | 104.8 | 4.1e-34 | 6.0e-30 | 104.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25581.1_69720.t1 | gi|340384379|ref|XP_003390690.1| | PREDICTED: ficolin-2-like [Amphimedon queenslandica] | 2.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_25581.1_69720.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25581.1_69720.t1 atgtatcgatcgatgttattcgatcgtttatattgctatcaaaatgtaaatttgatggaaagttcaagattaaaagagaa aattgtgaatccatttatctccttatcgatttgtaatgatggtaaatacactgttcccatcacgaatcttccctcttcta cactagaagttccgaactcttactatcagacggcgcaagaccgtaaggagttcccgctccgccagtcttctttcatacag tccacatcagcagaccatacccaaccagacgacatggtttgcaagatagctacctatttaaccgtgctgctagcaattgt aagttgctgtattggggttacgtttggaacaaaactaaaattcaagggtataaacaaaggagaagtcaaattcaaggatt gtgatcaaatcagacaggctgggtacatcgagtcgggaatctacacactgtggagggatgacaataactccttcaaggtc cactgtcaacatgaagccaacaactcctttacactcatccagaggcgtgttaacggtaacgtcgacttcgctcagccatg gcacatataccagaatgggtttggtagcgaaaacagcgactactgggccggactaaacaagatatactacctgacatata caggtcataacgtcctgagcataaccatgcaagactggaataacaatatcagaactgcccgctactcgcacttcaagctc caagattcctacagctacactctgtctatcggaggatacagcggtaacgtacctgatgacctcagtcacaataacaacat gag |
|
Protein
| Protein ID | pfu_aug1.0_25581.1_69720.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25581.1_69720.t1 MYRSMLFDRLYCYQNVNLMESSRLKEKIVNPFISLSICNDGKYTVPITNLPSSTLEVPNSYYQTAQDRKEFPLRQSSFIQ STSADHTQPDDMVCKIATYLTVLLAIVSCCIGVTFGTKLKFKGINKGEVKFKDCDQIRQAGYIESGIYTLWRDDNNSFKV HCQHEANNSFTLIQRRVNGNVDFAQPWHIYQNGFGSENSDYWAGLNKIYYLTYTGHNVLSITMQDWNNNIRTARYSHFKL QDSYSYTLSIGGYSGNVPDDLSHNNNM |
|