Gene
| Gene Model ID | pfu_aug1.0_25607.1_19085 |
|---|---|
| Locus | scaffold25607.1 : 2557 ... 11565 : - |
| To GenomeBrowser | scaffold25607.1:2557..11565 |
| Genes list of scaffold | scaffold25607.1 |
| Synonym | pfu_aug2.0_355.1_17325 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25607.1_19085.t1 | 7 | 1 | Ank_4 | 54 | 76 | 3.9e-31 | 106.8 | 0.069 | 170.0 | 2.8 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 1 | Ank_3 | 57 | 83 | 1.9e-24 | 83.2 | 0.017 | 41.0 | 4.8 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 1 | Ank | 58 | 83 | 1.1e-33 | 113.2 | 0.11 | 260.0 | 1.6 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 1 | Ank_5 | 58 | 89 | 1.9e-20 | 72.4 | 0.3 | 730.0 | 0.6 |
| pfu_aug1.0_25607.1_19085.t1 | 3 | 1 | Ank_2 | 64 | 161 | 5.0e-38 | 129.3 | 4.9e-19 | 1.2e-15 | 57.5 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 2 | Ank_4 | 102 | 153 | 3.9e-31 | 106.8 | 3.3e-11 | 8.2e-08 | 32.5 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 2 | Ank | 103 | 127 | 1.1e-33 | 113.2 | 9.0e-07 | 0.0022 | 17.6 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 2 | Ank_3 | 103 | 127 | 1.9e-24 | 83.2 | 3.5e-05 | 0.086 | 13.1 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 2 | Ank_5 | 106 | 137 | 1.9e-20 | 72.4 | 5.5e-05 | 0.14 | 12.4 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 3 | Ank_5 | 119 | 170 | 1.9e-20 | 72.4 | 8.6e-07 | 0.0021 | 18.2 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 3 | Ank_4 | 134 | 175 | 3.9e-31 | 106.8 | 4.7e-09 | 1.2e-05 | 25.7 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 3 | Ank | 135 | 163 | 1.1e-33 | 113.2 | 3.9e-07 | 0.00096 | 18.8 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 3 | Ank_3 | 135 | 161 | 1.9e-24 | 83.2 | 1.1e-06 | 0.0026 | 17.8 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 4 | Ank_5 | 152 | 195 | 1.9e-20 | 72.4 | 4.7e-08 | 0.00012 | 22.2 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 4 | Ank_3 | 165 | 192 | 1.9e-24 | 83.2 | 1.1e-06 | 0.0027 | 17.7 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 4 | Ank | 171 | 194 | 1.1e-33 | 113.2 | 2.0e-07 | 0.00048 | 19.7 |
| pfu_aug1.0_25607.1_19085.t1 | 3 | 2 | Ank_2 | 175 | 254 | 5.0e-38 | 129.3 | 6.8e-18 | 1.7e-14 | 53.9 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 4 | Ank_4 | 177 | 217 | 3.9e-31 | 106.8 | 1.8e-11 | 4.6e-08 | 33.3 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 5 | Ank_5 | 183 | 236 | 1.9e-20 | 72.4 | 1.8e-11 | 4.4e-08 | 33.1 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 5 | Ank_4 | 200 | 251 | 3.9e-31 | 106.8 | 6.5e-12 | 1.6e-08 | 34.8 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 5 | Ank_3 | 200 | 225 | 1.9e-24 | 83.2 | 3.2e-07 | 0.00078 | 19.4 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 5 | Ank | 201 | 230 | 1.1e-33 | 113.2 | 1.6e-08 | 4.0e-05 | 23.1 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 6 | Ank | 231 | 253 | 1.1e-33 | 113.2 | 0.015 | 38.0 | 4.3 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 6 | Ank_3 | 231 | 251 | 1.9e-24 | 83.2 | 0.37 | 920.0 | 0.6 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 6 | Ank_4 | 491 | 500 | 3.9e-31 | 106.8 | 0.57 | 1400.0 | -0.1 |
| pfu_aug1.0_25607.1_19085.t1 | 3 | 3 | Ank_2 | 492 | 556 | 5.0e-38 | 129.3 | 1.1e-06 | 0.0028 | 17.9 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 7 | Ank | 492 | 539 | 1.1e-33 | 113.2 | 1.8e-05 | 0.045 | 13.5 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 7 | Ank_3 | 492 | 535 | 1.9e-24 | 83.2 | 0.057 | 140.0 | 3.1 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 7 | Ank_4 | 523 | 548 | 3.9e-31 | 106.8 | 9.4e-05 | 0.23 | 12.0 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 6 | Ank_5 | 525 | 547 | 1.9e-20 | 72.4 | 0.00042 | 1.0 | 9.6 |
| pfu_aug1.0_25607.1_19085.t1 | 8 | 8 | Ank | 541 | 583 | 1.1e-33 | 113.2 | 0.04 | 99.0 | 3.0 |
| pfu_aug1.0_25607.1_19085.t1 | 7 | 7 | Ank_5 | 566 | 587 | 1.9e-20 | 72.4 | 0.09 | 220.0 | 2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25607.1_19085.t1 | gi|321477296|gb|EFX88255.1| | hypothetical protein DAPPUDRAFT_305705 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_25607.1_19085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25607.1_19085.t1 atggacgaggtatcaaaaagtctcgacagcttgacagaaaacatcaatgagtatatcgtggaggaatgcgatgagaccgc agaggaaattaaattgatgctggccaaattatcacgtgatcagagacgagaagtggtgtgcaaaggaataactttatccg ataaaaaacagacagcgttcttcagaagctgtattgaagggaatcttggacttgtagaatatttcataactgaatgtgat gccgatttggaagaaaaatgtccctatacagtagtggaagataacaattctactcacgaagtcccgccaatctgggtggc ggccattacagggcaactcgatttagccaaaatattactgaagtacggggcagacgtaaatggtatgtcggatagtaatt caactgccttacgtgcatcttgttacaaatgtaacctagagatggtcgaatatcttatctctgaaggcgcaaacgtcaat attccaaatcgctatgggtgttcatgtctcatgaatgcggtagaaagtacagaaattgtcaagtacttggtcgaacacgg agcagatatcaatgctagagaaaacggcaagttacagttgacggccgtacattatgctattcacaacaataatatggatg cattgaagttaatcgttgaagccggggcagacttaacgatacgagacaaagacgggaatatccctctcatctcagcagcc ttgttttctcaggataacatggtcaacttcttacgcgaacaagatggcacatccatggcggacgtgatgaaagcatatga acttttagcatgcgcagaattcgatgacggcaaagctagtgggattaactttcttataaaggctctggaaattcagagag acgagggactaccctcgaaagacgtcaacatagaaggtttcaagaatttattgcacaaaaccatcgttcccttaagtttg gaagatactcgtagtttgccttgtgatgagcagtctgcgcatgtcatggcggtggtcataaagtcacgttacttcccgcc acttcattacgagttcctatacagcatgctccaatatgcagcatcgcgacaaaaggagagggcatatcgggaagctttct caatatttaggtacgcgtatgacagatttctagagaaaaaaaaatggcttcacgacaacgcaatatacgccgttgctatg gtaacagtgacgtcgatggagatagtcaacgttgacccacgtacggtactacccgacctttgtagggtctttcgtttgct ttttactcaaataagacaaagtatgtccgaaggcaagcatgtgaaaaacgacgagaaaaggaaaaactttgacttcttac tgggcatatccctctacttaattaaacttctgtcacattcagattcggaattaacggcgccgtttttggacgacctccca cgactgatagctcttgatccgagattctcaaaaggcaatacacttctacacgctttggttagcgaatattttttcaacaa agtagaatatgtgaaaaaatcgaagcattcccccttgatggacttcaacacgataaagcttcttctaacgaatggagcca acgcggatgccaagaaccatgatgggaaaaccgcattacataagttagtgaacgagtacaaagagaagagagaatttgat aaagacttttttaaggaactagtccttttgttccttaataatgatgcccacattgacgtcagggataaatggacgacaaa ctgtcttcttgcaattcgcgattgtcgtctgcagctacaggaacttaattacagatctttaaaatgtttatcaaccaacg tcattatagaaaatgaaattccgtacgaagatatcttgccttcagtacttataccattcatagaacttcatttaccatgt aaatctaaagtaaggccagtggtgaagaaatttagggacatgcgcgggcgacatgcgcctttctaa |
|
Protein
| Protein ID | pfu_aug1.0_25607.1_19085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25607.1_19085.t1 MDEVSKSLDSLTENINEYIVEECDETAEEIKLMLAKLSRDQRREVVCKGITLSDKKQTAFFRSCIEGNLGLVEYFITECD ADLEEKCPYTVVEDNNSTHEVPPIWVAAITGQLDLAKILLKYGADVNGMSDSNSTALRASCYKCNLEMVEYLISEGANVN IPNRYGCSCLMNAVESTEIVKYLVEHGADINARENGKLQLTAVHYAIHNNNMDALKLIVEAGADLTIRDKDGNIPLISAA LFSQDNMVNFLREQDGTSMADVMKAYELLACAEFDDGKASGINFLIKALEIQRDEGLPSKDVNIEGFKNLLHKTIVPLSL EDTRSLPCDEQSAHVMAVVIKSRYFPPLHYEFLYSMLQYAASRQKERAYREAFSIFRYAYDRFLEKKKWLHDNAIYAVAM VTVTSMEIVNVDPRTVLPDLCRVFRLLFTQIRQSMSEGKHVKNDEKRKNFDFLLGISLYLIKLLSHSDSELTAPFLDDLP RLIALDPRFSKGNTLLHALVSEYFFNKVEYVKKSKHSPLMDFNTIKLLLTNGANADAKNHDGKTALHKLVNEYKEKREFD KDFFKELVLLFLNNDAHIDVRDKWTTNCLLAIRDCRLQLQELNYRSLKCLSTNVIIENEIPYEDILPSVLIPFIELHLPC KSKVRPVVKKFRDMRGRHAPF |
|