Gene
| Gene Model ID | pfu_aug1.0_25613.1_55082 |
|---|---|
| Locus | scaffold25613.1 : 1 ... 11971 : + |
| To GenomeBrowser | scaffold25613.1:1..11971 |
| Genes list of scaffold | scaffold25613.1 |
| Synonym | pfu_aug2.0_1579.1_31778 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25613.1_55082.t1 | 3 | 1 | RhoGEF | 53 | 83 | 7.0e-09 | 35.8 | 0.11 | 1600.0 | -1.2 |
| pfu_aug1.0_25613.1_55082.t1 | 3 | 2 | RhoGEF | 427 | 444 | 7.0e-09 | 35.8 | 8.6e-05 | 1.3 | 8.8 |
| pfu_aug1.0_25613.1_55082.t1 | 3 | 3 | RhoGEF | 448 | 477 | 7.0e-09 | 35.8 | 6.0e-10 | 8.8e-06 | 25.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_25613.1_55082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25613.1_55082.t1 ctccttcaaagacccaagtttttggataagttattcagcaatgtcggattaagtaaaaggaccccaaaacgacataagaa cggattgatcgtgccaattactggaatcccatgtgatgtggacgaggaaggcgaggaaagtgggcaggcaatagaacata gtatagaaacagaagacatacatgaggttttcagtgaccccgaacctgatctttcaccagaggaagaattcaaacaagca tttaacgaagcttggtcaacacccaattctccaaaagtgtcgggtattgtaaagcagcgattgcttgatttccaaaaact aagtcaaggttgtagatgtaggtcacaatcgacgccttcatcaccacgattagtgaaaagaaattcccttcgagtgaggc agagactttgtgatcaagttaagggggatagcaccgtagcacttcagggttcaagcttttctagagatgagaattttcga aaaagagttatgtcgaaaggatatgtgaaggctcttgtggagcaaatagacaaaaaccatgatcattcagatgatgacaa tcagcataacgtaagtgttgatattccaagcaatgtcaaaaatgaagaaaaagaaaagatgatcttagaggagcataatg taaaaccgtctgttgttgcgaagcaggaaagggaaagacactcgccaacacctccgccaaactttacaaagaaaagttct gtgattttagatagtaaaacttcgaaagaaatacaagcaacgtctgcgaaaaattccaaaggaaaggaaaaattaccatc tacagagaaagtagaagccgataaaaaggagctcaatgaaaaacaacaaattgatagtaacatttcaacgtcatttccgg ctgaagacaaacatgaaaacagaatacaagaaaattcggagacgcacgatacaaaagatgaaacatgtgaagtaacttct aacgtttacgacaatataagtttgcaaaccacaaacgcttctcatacgtcatcagcagatgtgtcagagggaccaattta cgggaatgtgtctggaacattgtccactaggacttcgaatggactcactacagatggtgagtccgggatagcatcggaaa caagcacacttggcatcactgcagcagagttgtttgactctagttggtcggactcggaacatagttttgaggagttcagc gattatgacagcgataacaaggaggatgagtgtgataagttggaaaccggtgccgaagagtgtaaattgaaaaagatctg caccgaattactttacacggaaaagtcgtacgtgaaaaggctgcatctactagacgtatcgagtccagaatgcggttgtc tcactctgcaacatcacatgctagagcccatccaacgtgttcctcgttatgaaatgcttcttaaagatatgttcgtcatc tttgcttttgtgtttcgtgaccatgtgaaactttcttaa |
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Protein
| Protein ID | pfu_aug1.0_25613.1_55082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25613.1_55082.t1 LLQRPKFLDKLFSNVGLSKRTPKRHKNGLIVPITGIPCDVDEEGEESGQAIEHSIETEDIHEVFSDPEPDLSPEEEFKQA FNEAWSTPNSPKVSGIVKQRLLDFQKLSQGCRCRSQSTPSSPRLVKRNSLRVRQRLCDQVKGDSTVALQGSSFSRDENFR KRVMSKGYVKALVEQIDKNHDHSDDDNQHNVSVDIPSNVKNEEKEKMILEEHNVKPSVVAKQERERHSPTPPPNFTKKSS VILDSKTSKEIQATSAKNSKGKEKLPSTEKVEADKKELNEKQQIDSNISTSFPAEDKHENRIQENSETHDTKDETCEVTS NVYDNISLQTTNASHTSSADVSEGPIYGNVSGTLSTRTSNGLTTDGESGIASETSTLGITAAELFDSSWSDSEHSFEEFS DYDSDNKEDECDKLETGAEECKLKKICTELLYTEKSYVKRLHLLDVSSPECGCLTLQHHMLEPIQRVPRYEMLLKDMFVI FAFVFRDHVKLS |
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