Gene
| Gene Model ID | pfu_aug1.0_2565.1_37320 |
|---|---|
| Locus | scaffold2565.1 : 30786 ... 35504 : + |
| To GenomeBrowser | scaffold2565.1:30786..35504 |
| Genes list of scaffold | scaffold2565.1 |
| Synonym | pfu_aug2.0_1842.1_08607 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2565.1_37320.t1 | 1 | 1 | Peptidase_C14 | 11 | 384 | 1.4e-25 | 90.4 | 3.5e-29 | 5.2e-25 | 88.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2565.1_37320.t1 | gi|115927329|ref|XP_789185.2| | PREDICTED: caspase-6 [Strongylocentrotus purpuratus] | 4.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2565.1_37320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2565.1_37320.t1 atgtatgactttacacatcgtaaacgaggatttgctgttcttgtcatatacaatgagttccagcatcaaccaaagaggga cagtgcaattcttgacatagatagcatgacagctgtcttccaaactctgggctttgatgtgttatgtctacagaatcaaa cgacagaacaattgataaagaatatgaaagttatcggtgagcacatcaaagaggatcatgactgctttgcttgtgttgtg agcacacacggtgcagagaccaagaaaaaaggctctcagttacggcaacaattactgtatacttatgatggaactgtgag ttgtgaagaactttttgagattttcaaagacagaaaatgtaaggctcttcgaggtaaaccaaggatttttttcgtacagg cttgtagaggggtcatgccagaaagaaagaaccattcggacatagaccgaggtaccgatgttaatatcagcagtccctac gtaaaaggaagctcggcagctaactttaataacagaagtaccccgagtggcaaagacaaccccgttccattagaacaaac acagagtaacagaaatgaaattgaaagtacagcggacacaagacatgggtatgaagattataattatgctaatcgaagat cagaagattgtcaaggacaggataacatgtacgcaaagtttgatgatgcaatgggacagattgatgatatcaccaggcga attcagcaacgaacaatgtcacctgggggatcgcaaggtgtccatcaacatactggagtcaggaatgagtctagtagaaa ttatgagaggaatggctatatgcagaacaatgtcatggaagataaacgaaacgaacaaagtcgtctgataccaaaaggat caaatgttaattcacagaatataccttttgcagatgacatgacggagttttacgtaccgaaaccgctaaaaccattagat ttttgtacaattcctgtgtacaatgactatgtagccatgttctcagccgcctctggtacaatagcttggagtgacggtga taaaggaggatggttactcttctgcctgtacaacgtcgtgaaggctctcagaaagtctgacttcgaaatcgatctcttac agattctcactgatacagctggtaaaatggccatagaaatgaggtcgtataattctaatcctaaatacgatggtgccaaa gctgctgctgtagtttaccatagactcaggaaagaaatatatttaacaccaaaatcacatgatctcgaaacatataatgt ctga |
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Protein
| Protein ID | pfu_aug1.0_2565.1_37320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2565.1_37320.t1 MYDFTHRKRGFAVLVIYNEFQHQPKRDSAILDIDSMTAVFQTLGFDVLCLQNQTTEQLIKNMKVIGEHIKEDHDCFACVV STHGAETKKKGSQLRQQLLYTYDGTVSCEELFEIFKDRKCKALRGKPRIFFVQACRGVMPERKNHSDIDRGTDVNISSPY VKGSSAANFNNRSTPSGKDNPVPLEQTQSNRNEIESTADTRHGYEDYNYANRRSEDCQGQDNMYAKFDDAMGQIDDITRR IQQRTMSPGGSQGVHQHTGVRNESSRNYERNGYMQNNVMEDKRNEQSRLIPKGSNVNSQNIPFADDMTEFYVPKPLKPLD FCTIPVYNDYVAMFSAASGTIAWSDGDKGGWLLFCLYNVVKALRKSDFEIDLLQILTDTAGKMAIEMRSYNSNPKYDGAK AAAVVYHRLRKEIYLTPKSHDLETYNV |
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