Gene
| Gene Model ID | pfu_aug1.0_25671.1_33523 |
|---|---|
| Locus | scaffold25671.1 : 5106 ... 8073 : + |
| To GenomeBrowser | scaffold25671.1:5106..8073 |
| Genes list of scaffold | scaffold25671.1 |
| Synonym | pfu_aug2.0_205.1_17119 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25671.1_33523.t1 | 2 | 1 | zf-B_box | 10 | 50 | 2.9e-13 | 49.4 | 3.5e-08 | 0.0001 | 22.0 |
| pfu_aug1.0_25671.1_33523.t1 | 2 | 2 | zf-B_box | 61 | 98 | 2.9e-13 | 49.4 | 2.2e-11 | 6.5e-08 | 32.3 |
| pfu_aug1.0_25671.1_33523.t1 | 5 | 1 | NHL | 342 | 359 | 4.6e-10 | 38.9 | 0.0047 | 14.0 | 5.8 |
| pfu_aug1.0_25671.1_33523.t1 | 5 | 2 | NHL | 376 | 390 | 4.6e-10 | 38.9 | 0.00065 | 1.9 | 8.5 |
| pfu_aug1.0_25671.1_33523.t1 | 5 | 3 | NHL | 415 | 449 | 4.6e-10 | 38.9 | 0.062 | 180.0 | 2.3 |
| pfu_aug1.0_25671.1_33523.t1 | 5 | 4 | NHL | 472 | 493 | 4.6e-10 | 38.9 | 0.021 | 61.0 | 3.8 |
| pfu_aug1.0_25671.1_33523.t1 | 5 | 5 | NHL | 512 | 536 | 4.6e-10 | 38.9 | 5.7e-05 | 0.17 | 11.9 |
Transcript
| Transcript ID | pfu_aug1.0_25671.1_33523.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25671.1_33523.t1 atggctgccttgtatcagtggacagtaccttgtatcatatgtgaagatcctgtggagttccattgtaatacatgtggaga tgctctctgctcaaggtgcaaggacaatcatctcaaaagtaatgccacgaagctgcatgatatcgtgccttactcacaac gctctatccctgtcaaaaacactaatgaatgcgagaaacaccatggtcagacatttaatgcatggtgtaaaacctgtaac gaacccgtttgtacagaatgcatgttgtctgcagcacacaatagacataattttgggaaattggaagaaaaaattatgga aaagaggaaagaacttcagagagaattgaatttccaatccagccttttagttaaacatgaatcaacattattttcagtaa aacaaaacagggactcatatgaaaaagaaatacaggttttaagtttagggatcggagctcatgctgacaaaatttgcaaa gaggtcagaactaaagagaagaaagccatgcagatactacaagatcttggtaacgaccatcaatcgaaatgtattcagta tgaatcttcaatcaaaaaagatatcaaaagatgcaaaaatcaattgaaagaaatagaggatgtccttaggtcaaatgact cgaccaaaatattaacacttaaaccaaaacgtggagagataagtacggatttgacacagactttaaacacccgtcctgtt ttcaagccaggagacatatcggtcaacgtgttggagaaagcatttggaagtctgtcagtgatgggaattgaaggtgcgaa ggcagattcaggtcctatctccagtactgcttctaagtcaaacgcctcagtagcaatatctacattgttaacggagaatg atcttgatcctgctataacctgtgtggatgcaaatcacgcctgggttgaaaccagtgatgcgaccctcaagctaatcgca agggatggaagtgtaatgaacaccatcctcttcgacttcagtttgaggttgatgaccttgagtgcggaaggtgatctgct gttgtgtgattttagcaacaaatgcatcaggtgtctacgtaaaggaaccaatgtcatgtccattctattccgcacagaga ctataccccatgatatctgctgcttgtcgtctggtgaaattttggtttctagtttcgctgaacgcagaatgactatatac agcagaactggacatgttgtgaaggaggtggacagcaaacttttccgttatccattttccgtgacacagcacaaagatag taaacttttgtacgtgagcgataaaagaggaaggcaactgtcggcacccggtagagtcgtctgctttgggatgaacaaca aaaagatgtatcagtacactggcaggaaaaatgctctcgactttactccttgttgtttatgtgttgatggtcgtggttac gtactcgtttccaattttgagagcaactctgtccacatcctgagcaaagagctcaactttctgcaatatctgatgccaaa gcaatctgtgaccagacctgtctgcattgatgttgatggcgacggacatgcttgggttggagaaagtcaaactcatgcaa tacagattgtgaaataccgtgtgaaataa |
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Protein
| Protein ID | pfu_aug1.0_25671.1_33523.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25671.1_33523.t1 MAALYQWTVPCIICEDPVEFHCNTCGDALCSRCKDNHLKSNATKLHDIVPYSQRSIPVKNTNECEKHHGQTFNAWCKTCN EPVCTECMLSAAHNRHNFGKLEEKIMEKRKELQRELNFQSSLLVKHESTLFSVKQNRDSYEKEIQVLSLGIGAHADKICK EVRTKEKKAMQILQDLGNDHQSKCIQYESSIKKDIKRCKNQLKEIEDVLRSNDSTKILTLKPKRGEISTDLTQTLNTRPV FKPGDISVNVLEKAFGSLSVMGIEGAKADSGPISSTASKSNASVAISTLLTENDLDPAITCVDANHAWVETSDATLKLIA RDGSVMNTILFDFSLRLMTLSAEGDLLLCDFSNKCIRCLRKGTNVMSILFRTETIPHDICCLSSGEILVSSFAERRMTIY SRTGHVVKEVDSKLFRYPFSVTQHKDSKLLYVSDKRGRQLSAPGRVVCFGMNNKKMYQYTGRKNALDFTPCCLCVDGRGY VLVSNFESNSVHILSKELNFLQYLMPKQSVTRPVCIDVDGDGHAWVGESQTHAIQIVKYRVK |
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