Gene
| Gene Model ID | pfu_aug1.0_257.1_50755 |
|---|---|
| Locus | scaffold257.1 : 110321 ... 120555 : - |
| To GenomeBrowser | scaffold257.1:110321..120555 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug2.0_221.1_03829 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_257.1_50755.t1 | 1 | 1 | DUF4371 | 238 | 474 | 7.8e-39 | 133.5 | 1.99965e-42 | 1.5e-38 | 132.7 |
| pfu_aug1.0_257.1_50755.t1 | 1 | 1 | Dimer_Tnp_hAT | 798 | 854 | 8.7e-08 | 31.6 | 3.9e-11 | 2.9e-07 | 30.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_257.1_50755.t1 | gi|221103923|ref|XP_002156569.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_257.1_50755.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_257.1_50755.t1 atgctaaatcacccgatttatagtatttacccatcattcccacatgtggctgtgaacagaaatgttcttcatcaagaaat acggcctttttcggacgattccaacaaccaagttgtaggatctactttgtatatcatgtggtcacacactgtaaacagcg gccaaaacaactggactcctaatcactttgttgcttgtttcccaattttatctactgattctgatgagaatgaacccgca acgaagaagtccaaaagcgacgggattgactcttctggagacagtcaaactaagtttgataatcctaaagaaaatattgc atctgatgagcaggaatacaaggaaacaaagacaaaaaaatcagatgaagatgaggacaaagaacattttgatgatccca aaatagatagatacgatctaggaaaaattgtaaatggtaccgttaaactgaacgtgatgtcatctgctgataaaataaac tacatcaaaaatcaacccctgccggaagtcattggtaaattaaatactggtcgtacacaaacgaaaagcggacacaaaaa aaccctttcatttcaagcttcatggatggttcaatttccatggttaaccttcagcaaacttctaaatggaggtctgtgca agttctgtgtcctatttcctcaatcaaattttcagcatcaagacacattcgtgacatcccctttcatctcttataagaag gcccttggtaaaaaatcttctcttttaaaacatcaatcatctgaacaccacaagaatgcaaaaatgtactatcaaacatt attggcttcaaccgaatcaccatctacatcccttccatataggtttaacaagcaaaatcaggccaattttgattgcaaca aaaaggttctcgagtcaattgtggacgctgtcatcttctgtggaaaacaaaacatccctctccgagggcacagagatgat tctacaagcgatgcctcaaataaaggcaatttcctggccattctaaaactgattgggaggcatgatgaattgctgtcctc tcacttggcatcagcaaaaaagaatgcatcatatacaagtaaaaccattcagaatgaaattattaaaattataggggata aagtaatcagcaacattttggagaccctacacgagagtaagttttattcaataatagccgatgaagtaaccgacaaattc acgaacaaagaagtgctggttttatgccttcggtttttgaacaccagagagagtcctgctgctataagagaagagttcat tgagtttgccaacatagaaaggaccactggcgaagcaattgctactaaaatccttgacatcctcaataggctcgggattc caatagaggatatgcgtggccaggcctacgatggtgcatcagccatggcatcagagaaacgggggtgtcagggtcggata aaatctttaaacaaactggctgtatatacccactgccggagccatgttttaaatctaagcattgcatcagcctgtcaatt acagtcggttaggaatatgatggatgttctaaactcagttttcattttcttcgatacttccccaaagagacattttacct tttttgagagtgtcctggaaagtgaatgttctgaatcgtcaagaaagaagcttgttggcctatgtaaaacaaggtgggta gagcgtcatgtttgctttgatgtgttctacaacttctattcttacatagtgaagtgtcttcaatatatggtgaacccaag ccttcatgaggagaccaacgaagactggtcttgggatagacaaagtaagataacagcacaagggttattaacatcactga cttctttccctatccttatcacctttgtctttgccaaatatgtaattgataccatcaagccccttactgtgaaacttcag aagcgagacaatgatattgccaaagccaacaagttaatcgttgaccatgtatcgagagtgaaagaaatgcgggaaaatgt tgatgatgaatttgaatcatgttttcttgatgcaaaaaagattgcagatgatatagaaatggaagtgacgattccgagga catgtggcaaacagaaacacagagttaatgtttcttcgaacgacccagcagaatattacaaactagcagttgccattcca ttcttagactatttccttcaggaattgagctctagatttttgaaagaagaccaggtagcatactcattatgttctttgtt gcccgagaacatagtctgcttttctgacgacgaattgtcaaaactagcatcggggctagaattttggaatgacgacttgc cttgtttgtctaaacgcgactttgtaagggagttgactgagtggagaagacagtgtaagacacctgctgagaaaacatct gacataccccaagatctgttaggtctcttcaacattgtggatgaagatacttatccaaatgtgaagagattgcttcacat agcatgcgtattgccaataacgacatgtgaagcagaacgatcgttttccgggcttcgacgaattaaaagctatttgcgta gggactactttaaaaaaacaacaacttttcagcaaaattctttcacacaagcattcctctaa |
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Protein
| Protein ID | pfu_aug1.0_257.1_50755.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_257.1_50755.t1 MLNHPIYSIYPSFPHVAVNRNVLHQEIRPFSDDSNNQVVGSTLYIMWSHTVNSGQNNWTPNHFVACFPILSTDSDENEPA TKKSKSDGIDSSGDSQTKFDNPKENIASDEQEYKETKTKKSDEDEDKEHFDDPKIDRYDLGKIVNGTVKLNVMSSADKIN YIKNQPLPEVIGKLNTGRTQTKSGHKKTLSFQASWMVQFPWLTFSKLLNGGLCKFCVLFPQSNFQHQDTFVTSPFISYKK ALGKKSSLLKHQSSEHHKNAKMYYQTLLASTESPSTSLPYRFNKQNQANFDCNKKVLESIVDAVIFCGKQNIPLRGHRDD STSDASNKGNFLAILKLIGRHDELLSSHLASAKKNASYTSKTIQNEIIKIIGDKVISNILETLHESKFYSIIADEVTDKF TNKEVLVLCLRFLNTRESPAAIREEFIEFANIERTTGEAIATKILDILNRLGIPIEDMRGQAYDGASAMASEKRGCQGRI KSLNKLAVYTHCRSHVLNLSIASACQLQSVRNMMDVLNSVFIFFDTSPKRHFTFFESVLESECSESSRKKLVGLCKTRWV ERHVCFDVFYNFYSYIVKCLQYMVNPSLHEETNEDWSWDRQSKITAQGLLTSLTSFPILITFVFAKYVIDTIKPLTVKLQ KRDNDIAKANKLIVDHVSRVKEMRENVDDEFESCFLDAKKIADDIEMEVTIPRTCGKQKHRVNVSSNDPAEYYKLAVAIP FLDYFLQELSSRFLKEDQVAYSLCSLLPENIVCFSDDELSKLASGLEFWNDDLPCLSKRDFVRELTEWRRQCKTPAEKTS DIPQDLLGLFNIVDEDTYPNVKRLLHIACVLPITTCEAERSFSGLRRIKSYLRRDYFKKTTTFQQNSFTQAFL |
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