Gene
| Gene Model ID | pfu_aug1.0_2573.1_44416 |
|---|---|
| Locus | scaffold2573.1 : 10191 ... 32845 : - |
| To GenomeBrowser | scaffold2573.1:10191..32845 |
| Genes list of scaffold | scaffold2573.1 |
| Synonym | pfu_aug2.0_1158.1_28099 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2573.1_44416.t1 | 2 | 1 | CBM_14 | 37 | 78 | 6.6e-10 | 38.7 | 1.4e-10 | 2.1e-06 | 27.5 |
| pfu_aug1.0_2573.1_44416.t1 | 2 | 2 | CBM_14 | 88 | 127 | 6.6e-10 | 38.7 | 4.7e-07 | 0.007 | 16.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2573.1_44416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2573.1_44416.t1 atgtgtctctttgtatttttcttgaatatatcgccagtctaccttaattacaatgcaggggatgacgatagcaaagactg tttctgtggaagagatatatgctttgaatctgtacaaggggactgcacaaagtatatccaatgtacaagcgtagatggac aagtatttagacgggaaattcaatgtccatatggcctattttgggacagtccaacggaatcttgcagaacgtcattgact gtcaatttttccgaagatccttgcaggaatgcacctaatggctattccttcgtaacgctcaatatgggttgccgtgcata ctgggtttgcataaatggtcgaagtatactaagctgctgtcctctcggatcgacatatgtctccggattaggatgtataa atagtcccgaatgcaacgatccgtattaccgtcatacggtatctacatttcacagctcatccagtatgctagagcatata ccagacatcacatcatttggcaaaattttgaattgtgacgccatatttgaacgcaacgacttcatgcgttgtcatgtttt ctatcatgacgtcacaataaaaatgtttccaaattgtgtgatgtctggtgtctgtccgctcaatgaatctactggaaaat cagccattggtatatatatataa |
|
Protein
| Protein ID | pfu_aug1.0_2573.1_44416.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2573.1_44416.t1 MCLFVFFLNISPVYLNYNAGDDDSKDCFCGRDICFESVQGDCTKYIQCTSVDGQVFRREIQCPYGLFWDSPTESCRTSLT VNFSEDPCRNAPNGYSFVTLNMGCRAYWVCINGRSILSCCPLGSTYVSGLGCINSPECNDPYYRHTVSTFHSSSSMLEHI PDITSFGKILNCDAIFERNDFMRCHVFYHDVTIKMFPNCVMSGVCPLNESTGKSAIGIYI |
|