Gene
| Gene Model ID | pfu_aug1.0_2573.1_44419 |
|---|---|
| Locus | scaffold2573.1 : 49416 ... 54485 : - |
| To GenomeBrowser | scaffold2573.1:49416..54485 |
| Genes list of scaffold | scaffold2573.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2573.1_44419.t1 | 1 | 1 | Ubie_methyltran | 25 | 113 | 1.9e-07 | 30.4 | 2.6e-10 | 2.1e-07 | 30.2 |
| pfu_aug1.0_2573.1_44419.t1 | 1 | 1 | Methyltransf_31 | 28 | 119 | 2.7e-21 | 75.7 | 3.8e-24 | 3.1e-21 | 75.5 |
| pfu_aug1.0_2573.1_44419.t1 | 1 | 1 | PCMT | 28 | 90 | 3.5e-07 | 29.9 | 4.4e-10 | 3.6e-07 | 29.9 |
| pfu_aug1.0_2573.1_44419.t1 | 1 | 1 | Methyltransf_18 | 29 | 112 | 4.0e-09 | 37.0 | 6.0e-12 | 4.9e-09 | 36.7 |
| pfu_aug1.0_2573.1_44419.t1 | 1 | 1 | Methyltransf_25 | 31 | 113 | 8.8e-10 | 38.8 | 1.4e-12 | 1.2e-09 | 38.4 |
| pfu_aug1.0_2573.1_44419.t1 | 1 | 1 | Methyltransf_11 | 32 | 115 | 2.0e-09 | 37.8 | 3.3e-12 | 2.7e-09 | 37.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2573.1_44419.t1 | gi|124481691|gb|AAI33181.1| | LOC100037130 protein [Xenopus laevis] | 5.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_2573.1_44419.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2573.1_44419.t1 atgtatgttgcagtcgtacatattatcctgctgttcatgtgatattacggatgtggtttagtaataccagaaaaactaag agatatgaaggtccttgatctcggaagtggaagtggcagagattgctttgctctgagcaagttagtaggccaggatggtc acgtgacaggtattgatatgacagacgaacagatagagacatctcgaaagtacatagactatcacacacagaaatatgga tatgaaaagcctaatattgagtttgtacagggttacatagaaaagatgatggagtctggcttccaggaaaatcactttga cattgtcattaagcggatgaccgtcatctcaacatgtcagtatcaaaaagcaacggatatctaa |
|
Protein
| Protein ID | pfu_aug1.0_2573.1_44419.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2573.1_44419.t1 MYVAVVHIILLFMXYYGCGLVIPEKLRDMKVLDLGSGSGRDCFALSKLVGQDGHVTGIDMTDEQIETSRKYIDYHTQKYG YEKPNIEFVQGYIEKMMESGFQENHFDIVIKRMTVISTCQYQKATDI |
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