Gene
| Gene Model ID | pfu_aug1.0_25730.1_26266 |
|---|---|
| Locus | scaffold25730.1 : 1 ... 13573 : + |
| To GenomeBrowser | scaffold25730.1:1..13573 |
| Genes list of scaffold | scaffold25730.1 |
| Synonym | pfu_aug2.0_1240.1_01494 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25730.1_26266.t1 | 1 | 1 | RhoGEF | 116 | 252 | 7.8e-22 | 78.0 | 1.9e-25 | 1.4e-21 | 77.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25730.1_26266.t1 | gi|291232923|ref|XP_002736403.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_25730.1_26266.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25730.1_26266.t1 ggaaaacggaaacggaaagatagggacgaggatacacttagcattcagagttatgatgtcacaaaggtcaagaaaaagac tcgccgctctctcatgcggatgtcctcatcaatcgccaatcttttatctcccataaagccgtcaaagaaggaaaatgaat ttcagaggtccaccagcttcaaagtgccatgctcgccatcaccgaaacataacgtcacaccgtacaaagccccgtcacca tctcccgtcaaacgtcgtctgagccgtacttggagcgagatgatctctgcagagggaagcatgccgacagaactcactca gagagatattaaacgacaagaggccatatatgaattgtatcaaggtgaaaatgacctggtcgaagacttgaacattgtga aaaagacatacagagattctatggagaaactaaagctaatgacagaatgggagcttgaccagatatttggacctgtagac cagttaatacccattcatgaagatttgtcaaataagttactaaatgagagactgccaaatggtacaacacaggatgttgg tagtatactattagaatgggcacccagactgagggattatgtacatttctgtgccaatcaagtatttggtaaggccctat tagacgagaagaaaaacgacccgtccgttgacgacttccttcagagatgtcaggactctccattcagcagaaaactagat ttgtggacacttcttgccaagaacgttttccgtgtgtcgtttaaagattccagccgaggacagtctcacacacttatagc gacagacgagcacagtaagaggcagtggatgcagtgtttacagacggctctcgacaactgtccgatccaggatgaggatc catgtctcgagaggcgttccgaacctgacggaaaagaatctgacagctccttggatgaaaaacatgaggacaatatcttc gatcttgatgtcgtgccgctatccgatgaggacaacgaaaatatccataataatgtcaaggtcaacagaattcgtaaaag ttcaga |
|
Protein
| Protein ID | pfu_aug1.0_25730.1_26266.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25730.1_26266.t1 GKRKRKDRDEDTLSIQSYDVTKVKKKTRRSLMRMSSSIANLLSPIKPSKKENEFQRSTSFKVPCSPSPKHNVTPYKAPSP SPVKRRLSRTWSEMISAEGSMPTELTQRDIKRQEAIYELYQGENDLVEDLNIVKKTYRDSMEKLKLMTEWELDQIFGPVD QLIPIHEDLSNKLLNERLPNGTTQDVGSILLEWAPRLRDYVHFCANQVFGKALLDEKKNDPSVDDFLQRCQDSPFSRKLD LWTLLAKNVFRVSFKDSSRGQSHTLIATDEHSKRQWMQCLQTALDNCPIQDEDPCLERRSEPDGKESDSSLDEKHEDNIF DLDVVPLSDEDNENIHNNVKVNRIRKSS |
|