Gene
| Gene Model ID | pfu_aug1.0_2574.1_51724 |
|---|---|
| Locus | scaffold2574.1 : 9836 ... 18927 : + |
| To GenomeBrowser | scaffold2574.1:9836..18927 |
| Genes list of scaffold | scaffold2574.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2574.1_51724.t1 | 1 | 1 | ERAP1_C | 103 | 289 | 5.3e-37 | 127.7 | 1.2e-40 | 9.2e-37 | 126.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2574.1_51724.t1 | gi|300798341|ref|NP_001180088.1| | puromycin-sensitive aminopeptidase [Bos taurus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2574.1_51724.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2574.1_51724.t1 atgaatcagtatctaaccaagttcaaatacagcaatgcttttactgaggatctttgggactctctgcaagatgccagtgg taaacctgtacataaagtcatgaatacatggacaaaacaaatgggttatcccgtcatcaaggttactgagaggcaagatg gagacaaacgagtcatgacactttcacaagagaagttttgtgcagatggaaaacaacctgaagaccatattagagcctgt attgcacctatgatcatgaaacttgccagaaatgtttcccatgaatcaaggatgatccctattgattttaaggttaacag tggaacagtgggagtgtacagagtacagtatacatcagagtccttagaacgttttataccagccattaaagataaaagtt taccagcaaccgatagacttggacttcagagtgacctttttgcattggcgagggcaggtatggtgtcggctgtagatgtc ctaaaggtagccgaggcatacattaacgaggataactatactgtatggagtgacctgggtatgagcctgggaggagtggg aatcatcctacagaacacagacagctatgataagtacaaggcattcactaggaaactgtttaagcctgtagccgactccg tgggatgggaccccaaggctgatgaaggtcccttggtagccatgttaagagacctcgccctaggtaagcttggtcgtagt aatgatgaagccaccgtagccgaagccaggaagagatttgatgcccacgttgctgggacaaccacactgtctgctgatct taaaagtccagtatatagtatagtgatgtcaaacggtgatcaggaagcatatgataagatgatgaagacagtcaatatta cagaaaatgtcaacctatattcacgacacattattatgtatgacttcatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2574.1_51724.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2574.1_51724.t1 MNQYLTKFKYSNAFTEDLWDSLQDASGKPVHKVMNTWTKQMGYPVIKVTERQDGDKRVMTLSQEKFCADGKQPEDHIRAC IAPMIMKLARNVSHESRMIPIDFKVNSGTVGVYRVQYTSESLERFIPAIKDKSLPATDRLGLQSDLFALARAGMVSAVDV LKVAEAYINEDNYTVWSDLGMSLGGVGIILQNTDSYDKYKAFTRKLFKPVADSVGWDPKADEGPLVAMLRDLALGKLGRS NDEATVAEARKRFDAHVAGTTTLSADLKSPVYSIVMSNGDQEAYDKMMKTVNITENVNLYSRHIIMYDFM |
|