Gene
| Gene Model ID | pfu_aug1.0_25790.1_26269 |
|---|---|
| Locus | scaffold25790.1 : 1635 ... 8073 : - |
| To GenomeBrowser | scaffold25790.1:1635..8073 |
| Genes list of scaffold | scaffold25790.1 |
| Synonym | pfu_aug2.0_2209.1_32094 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25790.1_26269.t1 | 3 | 1 | Lectin_C | 11 | 90 | 7.0e-18 | 65.2 | 1.2e-11 | 1.7e-07 | 31.8 |
| pfu_aug1.0_25790.1_26269.t1 | 3 | 2 | Lectin_C | 118 | 227 | 7.0e-18 | 65.2 | 9.7e-15 | 1.4e-10 | 41.6 |
| pfu_aug1.0_25790.1_26269.t1 | 3 | 3 | Lectin_C | 272 | 347 | 7.0e-18 | 65.2 | 0.007 | 100.0 | 3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25790.1_26269.t1 | gi|301619331|ref|XP_002939048.1| | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_25790.1_26269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25790.1_26269.t1 ccgatatccttatgcctaaatcgatggacatcattaatgacgtcacatccatttggtgtgacaaaatatggataggctta aatggcacagatgattctgaatccattgacgacttccggtggatcgatggaacagcccttacctttacaaactggaaaga tgaggaagaattcgatgaggaccagctttgcacatccatgcaagattgtggaaaaacagaatgggaaattgaaaattgtt cgcaagaagaatatccgttcgtctgtcaaaagttaaacgtggagaatcaatgtcttgcaaattggaccagatcccctagt agtggcatgtgttataatgagatgggcttgggtaactttacagaggcaatgggtaactgttcatctataaatgcagaaat cgtcatgccaaagactgaagaagaaagcaaaatattaacaaaaatattagagaatcgccagatagataatatcttcatcg gcttggaactggacacctctagacgttcttatcaatggcaagacggtactccattaagctttactaattgggaaggcggg aactatgaattttggcatttcgtggcctggcacattgatgcctgcgtttctatgtctaaatcatgggattacagttggta tgacagcatttactgcaatctatcgaatactattatgtgtcaatgcagattacaagtcatggactttccacgaaatccga actatgtgtattgcacagatacgttagaatctagtacagaaacattcggagaaagtagccacacagtccaaaatactgaa acatcatccaaagtgagcaaatcttctctaaatcagatcaatacaagtgaaaactcaacattgctcttaaaaatccttgc atacagtggaaatacaaatccaacatggagtacccatacaaagaccgagttacagtggaaccaggactcgtttgaaagta tttcggcgttcggacagaaaacaagggaaactacaacatttgtatgggggcaaaataccaccgtaacaagagaatgtttc gaaggttgtaattgtaatgagagaccgactgaaagtgaattggctcataaacttgcaaacatgagatcaaatctgacgat agataaagcaaacttgtcgtcaacaattcgaaaattaacatgcgctgacgatcagagggcaagtagcagaattatgggat atgtaggtggcgctgttgtagttatcgtcatcagtttcctagttttcatagatttactttctctgtggaaggtataa |
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Protein
| Protein ID | pfu_aug1.0_25790.1_26269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25790.1_26269.t1 DILMPKSMDIINDVTSIWCDKIWIGLNGTDDSESIDDFRWIDGTALTFTNWKDEEEFDEDQLCTSMQDCGKTEWEIENCS QEEYPFVCQKLNVENQCLANWTRSPSSGMCYNEMGLGNFTEAMGNCSSINAEIVMPKTEEESKILTKILENRQIDNIFIG LELDTSRRSYQWQDGTPLSFTNWEGGNYEFWHFVAWHIDACVSMSKSWDYSWYDSIYCNLSNTIMCQCRLQVMDFPRNPN YVYCTDTLESSTETFGESSHTVQNTETSSKVSKSSLNQINTSENSTLLLKILAYSGNTNPTWSTHTKTELQWNQDSFESI SAFGQKTRETTTFVWGQNTTVTRECFEGCNCNERPTESELAHKLANMRSNLTIDKANLSSTIRKLTCADDQRASSRIMGY VGGAVVVIVISFLVFIDLLSLWKV |
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