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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2580.1_58960
Locus scaffold2580.1 : 18232 ... 40055 : -
To GenomeBrowser scaffold2580.1:18232..40055
Genes list of scaffold scaffold2580.1
Synonym pfu_aug2.0_18402.1_09938

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2580.1_58960.t1 gi|241626042|ref|XP_002409600.1| hypothetical protein IscW_ISCW020520 [Ixodes scapularis] 6.0e-11

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_2580.1_58960.t1
Definition-
>pfu_aug1.0_2580.1_58960.t1
atgttcactttgaaggaagaggaaaggaatggtgatgtcaaagattctcattggataaaagaagagaaagaacgacacac
taagaagttaccaactccccctgtggcagatatcaaggaagaggctcagatctttactcttataccattcttgtttatac
ttaancgtcacgcttgtcctctttttcgaatcgataaagcagataaaacctcagaactgagctgcacagacacccctgcc
gtattccagtcagccattgaagaacttagaaaggaactacgggaactgaaagcaaataccgtatctaaagcagcatttga
agaactaaaatcagaaaatgaaaaattgaaacaagacgtggaaactctaaagtcttcatattccaagaaaattcgtgacc
ttacaaacgaagtggatgatgagaaaaagattagactcaatacccaagtggaaatagagaggataagaaaattagtgaat
gagtctcatgtataa

Protein
Protein IDpfu_aug1.0_2580.1_58960.t1
Definition-
>pfu_aug1.0_2580.1_58960.t1
MFTLKEEERNGDVKDSHWIKEEKERHTKKLPTPPVADIKEEAQIFTLIPFLFILXRHACPLFRIDKADKTSELSCTDTPA
VFQSAIEELRKELRELKANTVSKAAFEELKSENEKLKQDVETLKSSYSKKIRDLTNEVDDEKKIRLNTQVEIERIRKLVN
ESHV

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