Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2585.1_58962
Locus scaffold2585.1 : 1 ... 7108 : +
To GenomeBrowser scaffold2585.1:1..7108
Genes list of scaffold scaffold2585.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2585.1_58962.t1 1 1 R3H 5 58 1.0e-14 53.9 8.1e-19 1.2e-14 53.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2585.1_58962.t1 gi|41055106|ref|NP_957419.1| sperm-associated antigen 7 homolog [Danio rerio] 8.0e-13

Transcript
Transcript IDpfu_aug1.0_2585.1_58962.t1
Definition-
>pfu_aug1.0_2585.1_58962.t1
acacaaaaaagaattcatgagttcattaaggatcctagtttacagaaatacaagtttgaagcgatggataaagtgttccg
agctataatacatgaagtggcggacgttgccggtctcacatcattttcctttggtctggaggaacaagatcgctacgtta
tgttatggaaaaagctcgacaaactacggccaatagatcgtatgggtttgttcctagtgaaaataaaagggatagacgga
cagtag

Protein
Protein IDpfu_aug1.0_2585.1_58962.t1
Definition-
>pfu_aug1.0_2585.1_58962.t1
TQKRIHEFIKDPSLQKYKFEAMDKVFRAIIHEVADVAGLTSFSFGLEEQDRYVMLWKKLDKLRPIDRMGLFLVKIKGIDG
Q

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