Gene
| Gene Model ID | pfu_aug1.0_2596.1_66388 |
|---|---|
| Locus | scaffold2596.1 : 18110 ... 36215 : - |
| To GenomeBrowser | scaffold2596.1:18110..36215 |
| Genes list of scaffold | scaffold2596.1 |
| Synonym | pfu_aug2.0_529.1_30866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2596.1_66388.t1 | 15 | 1 | LRR_1 | 111 | 126 | 7.6e-30 | 98.3 | 0.016 | 35.0 | 4.9 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 1 | LRR_8 | 111 | 166 | 0.0 | 154.8 | 5.0e-11 | 1.1e-07 | 31.5 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 1 | LRR_4 | 112 | 147 | 2.8026e-45 | 151.4 | 9.4e-09 | 2.0e-05 | 24.0 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 1 | LRR_7 | 131 | 147 | 2.7e-15 | 53.7 | 0.0036 | 7.6 | 7.2 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 2 | LRR_1 | 132 | 153 | 7.6e-30 | 98.3 | 0.00038 | 0.8 | 9.9 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 2 | LRR_7 | 154 | 170 | 2.7e-15 | 53.7 | 4.0e-05 | 0.084 | 13.1 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 2 | LRR_8 | 154 | 212 | 0.0 | 154.8 | 1.3e-15 | 2.8e-12 | 46.1 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 2 | LRR_4 | 154 | 194 | 2.8026e-45 | 151.4 | 1.5e-13 | 3.2e-10 | 39.3 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 3 | LRR_1 | 155 | 176 | 7.6e-30 | 98.3 | 8.0e-05 | 0.17 | 12.0 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 3 | LRR_4 | 177 | 224 | 2.8026e-45 | 151.4 | 4.7e-12 | 1.0e-08 | 34.6 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 3 | LRR_7 | 177 | 193 | 2.7e-15 | 53.7 | 4.9e-05 | 0.1 | 12.8 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 4 | LRR_1 | 178 | 194 | 7.6e-30 | 98.3 | 1.4e-05 | 0.03 | 14.3 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 4 | LRR_4 | 201 | 239 | 2.8026e-45 | 151.4 | 1.1e-09 | 2.4e-06 | 27.0 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 5 | LRR_1 | 201 | 222 | 7.6e-30 | 98.3 | 0.0025 | 5.3 | 7.4 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 4 | LRR_7 | 201 | 214 | 2.7e-15 | 53.7 | 0.071 | 150.0 | 3.3 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 3 | LRR_8 | 201 | 258 | 0.0 | 154.8 | 1.1e-11 | 2.4e-08 | 33.6 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 5 | LRR_7 | 221 | 236 | 2.7e-15 | 53.7 | 0.27 | 570.0 | 1.5 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 5 | LRR_4 | 223 | 262 | 2.8026e-45 | 151.4 | 6.6e-10 | 1.4e-06 | 27.7 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 6 | LRR_1 | 224 | 244 | 7.6e-30 | 98.3 | 0.013 | 28.0 | 5.2 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 4 | LRR_8 | 224 | 281 | 0.0 | 154.8 | 1.0e-08 | 2.2e-05 | 24.1 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 7 | LRR_1 | 247 | 268 | 7.6e-30 | 98.3 | 4.6e-05 | 0.099 | 12.7 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 6 | LRR_7 | 247 | 262 | 2.7e-15 | 53.7 | 0.0037 | 7.8 | 7.1 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 5 | LRR_8 | 247 | 304 | 0.0 | 154.8 | 4.8e-09 | 1.0e-05 | 25.1 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 6 | LRR_4 | 271 | 308 | 2.8026e-45 | 151.4 | 4.3e-10 | 9.2e-07 | 28.3 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 8 | LRR_1 | 271 | 291 | 7.6e-30 | 98.3 | 0.00021 | 0.45 | 10.7 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 7 | LRR_7 | 271 | 284 | 2.7e-15 | 53.7 | 0.46 | 980.0 | 0.8 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 6 | LRR_8 | 271 | 310 | 0.0 | 154.8 | 4.0e-08 | 8.5e-05 | 22.2 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 9 | LRR_1 | 293 | 314 | 7.6e-30 | 98.3 | 0.0013 | 2.8 | 8.3 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 8 | LRR_7 | 293 | 308 | 2.7e-15 | 53.7 | 0.0041 | 8.6 | 7.0 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 7 | LRR_8 | 293 | 350 | 0.0 | 154.8 | 3.5e-13 | 7.3e-10 | 38.4 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 7 | LRR_4 | 297 | 331 | 2.8026e-45 | 151.4 | 1.2e-07 | 0.00026 | 20.5 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 10 | LRR_1 | 319 | 338 | 7.6e-30 | 98.3 | 0.0035 | 7.3 | 7.0 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 9 | LRR_7 | 320 | 331 | 2.7e-15 | 53.7 | 0.79 | 1700.0 | 0.1 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 8 | LRR_4 | 322 | 354 | 2.8026e-45 | 151.4 | 1.0e-07 | 0.00022 | 20.7 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 10 | LRR_7 | 339 | 353 | 2.7e-15 | 53.7 | 0.18 | 380.0 | 2.0 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 11 | LRR_1 | 340 | 354 | 7.6e-30 | 98.3 | 0.11 | 230.0 | 2.4 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 8 | LRR_8 | 365 | 413 | 0.0 | 154.8 | 7.8e-09 | 1.6e-05 | 24.5 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 9 | LRR_4 | 367 | 378 | 2.8026e-45 | 151.4 | 0.2 | 430.0 | 0.6 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 12 | LRR_1 | 367 | 384 | 7.6e-30 | 98.3 | 0.026 | 56.0 | 4.3 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 11 | LRR_7 | 387 | 403 | 2.7e-15 | 53.7 | 0.0075 | 16.0 | 6.2 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 10 | LRR_4 | 388 | 419 | 2.8026e-45 | 151.4 | 5.2e-06 | 0.011 | 15.3 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 13 | LRR_1 | 388 | 410 | 7.6e-30 | 98.3 | 0.0005 | 1.0 | 9.6 |
| pfu_aug1.0_2596.1_66388.t1 | 9 | 9 | LRR_8 | 408 | 458 | 0.0 | 154.8 | 1.7e-05 | 0.035 | 13.8 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 14 | LRR_1 | 409 | 427 | 7.6e-30 | 98.3 | 0.0037 | 7.8 | 6.9 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 12 | LRR_7 | 409 | 425 | 2.7e-15 | 53.7 | 0.0012 | 2.6 | 8.6 |
| pfu_aug1.0_2596.1_66388.t1 | 13 | 13 | LRR_7 | 432 | 448 | 2.7e-15 | 53.7 | 0.055 | 120.0 | 3.6 |
| pfu_aug1.0_2596.1_66388.t1 | 11 | 11 | LRR_4 | 433 | 458 | 2.8026e-45 | 151.4 | 0.00043 | 0.92 | 9.2 |
| pfu_aug1.0_2596.1_66388.t1 | 15 | 15 | LRR_1 | 433 | 450 | 7.6e-30 | 98.3 | 0.0012 | 2.6 | 8.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2596.1_66388.t1 | gi|156550592|ref|XP_001603998.1| | PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia vitripennis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2596.1_66388.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2596.1_66388.t1 atggctcattacgatattagcagtgcaccgcctttcgtgaatccaggatctagtttaactcagtctgacattgatgatat tgcaccaggatcaagagaaccagctaacttggatgacacagtttctattggtgatggcagagatgcaagccgaggcgttg agaaaaagggaagttccggaagtatttctacaaatgacccatcacgaccaaagacagtcacggttaaacagccaggaaag aaaaacaaagctacagtcccaaagaaaatgccaccaaaggctgatctggatgtttcaaaggaattcaaaaagtgtatagc tgatgaagccaaacgtttagatctaagtaaatcacagatttctgttatccctaatacagttaaagagttaacacagctac aagaattttacttgtatggaaacaagttagggactttacctccagagattggttgcttaacgaatcttcagaaacttgga ctaagtgagaattcactaactacgcttcctgaaactttgcagaatctgacgcaattacgagtactggatctacggcataa tagactcaatgagattccagaagttgtataccaactacggtcattaacaactttattccttaggtttaacagaattaaac atgtagatgaagctattagtaatttaaaaaatttaacaatatttagtttacgagaaaacaaaatacccaaattaccacaa ggcattggccagctggttaacttggtgacatttgatatttctcacaatcatctggagcacctacctgttgaaattggtaa ttgtgtgatgctgaattcccttgatctccaacacaatgaacttctagatatcccagagtcaataggcaatttgaaatctc tgtcacgtctaggcttaaggtataacaggttgacttttatacctaagacgttagccaactgtataaatatggacgagttc aatgtggagggaaacaacatatcacaattacccgaaggtctattgtctagcttaacaaatttgaccagtataacgttatc acggaatgctttccaatcctacccctcaggaggtcccgctcagttctgttctgtatattccatcaatatggagcacaatc agataaacaaaattccactaggaatattctcacgagcttcaagtctcaccaaactcaacatgaaagacaaccagctctcc ttcttgccattaggtacattagagaacctagagtctttgtatataaatgataatccagaactgcacagtttaccttacga actagtcttgtgtggaaacctgcaaattatgagcatagaaaactgcccattaagtcagattcccccagaaatagtagcca aaggtccctcattggtaatccagtatttgagaatacagagtccctactgtcagatgtaa |
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Protein
| Protein ID | pfu_aug1.0_2596.1_66388.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2596.1_66388.t1 MAHYDISSAPPFVNPGSSLTQSDIDDIAPGSREPANLDDTVSIGDGRDASRGVEKKGSSGSISTNDPSRPKTVTVKQPGK KNKATVPKKMPPKADLDVSKEFKKCIADEAKRLDLSKSQISVIPNTVKELTQLQEFYLYGNKLGTLPPEIGCLTNLQKLG LSENSLTTLPETLQNLTQLRVLDLRHNRLNEIPEVVYQLRSLTTLFLRFNRIKHVDEAISNLKNLTIFSLRENKIPKLPQ GIGQLVNLVTFDISHNHLEHLPVEIGNCVMLNSLDLQHNELLDIPESIGNLKSLSRLGLRYNRLTFIPKTLANCINMDEF NVEGNNISQLPEGLLSSLTNLTSITLSRNAFQSYPSGGPAQFCSVYSINMEHNQINKIPLGIFSRASSLTKLNMKDNQLS FLPLGTLENLESLYINDNPELHSLPYELVLCGNLQIMSIENCPLSQIPPEIVAKGPSLVIQYLRIQSPYCQM |
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