Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2596.1_66389
Locus scaffold2596.1 : 38706 ... 46333 : +
To GenomeBrowser scaffold2596.1:38706..46333
Genes list of scaffold scaffold2596.1
Synonym pfu_aug2.0_529.1_30867

Manual annotation
Study fieldBiomineralization
Gene namePfu-000027
DescriptionNCBI blastx best hit to ABW90364.1.
mRNA evidence

Study fieldBiomineralization
Gene namePfu-ribosomal protein L32 like
DescriptionNCBI blastx best hit to ACR24953.1.
mRNA evidence

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
egg-4cell 1
8-16cell 1
>Adult tissues
adductorMuscle 1
mantle 1
mantleEdge 1
mantlePallium 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_2596.1_66389.t1
Definition-
>pfu_aug1.0_2596.1_66389.t1
atggctattcgtcccctggtaaagcaaagaaatgttaaaaagaggaacaagaagtttatcagacatcagtctgatagata
tgtaaaagtaaaggcgagtgatttgtcccccttgggcctcttgtcatttggtaccttggcctttgacctagtgaacttgg
actatgacctactttttaaacagttggcagcttctacgaaaatgtgcacgaactga

Protein
Protein IDpfu_aug1.0_2596.1_66389.t1
Definition-
>pfu_aug1.0_2596.1_66389.t1
MAIRPLVKQRNVKKRNKKFIRHQSDRYVKVKASDLSPLGLLSFGTLAFDLVNLDYDLLFKQLAASTKMCTN

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