Gene
| Gene Model ID | pfu_aug1.0_2598.1_01165 |
|---|---|
| Locus | scaffold2598.1 : 10236 ... 21180 : + |
| To GenomeBrowser | scaffold2598.1:10236..21180 |
| Genes list of scaffold | scaffold2598.1 |
| Synonym | pfu_aug2.0_757.1_24371 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2598.1_01165.t1 | 2 | 1 | Membralin | 22 | 374 | 0.0 | 462.4 | 0.0 | 0.0 | 462.4 |
| pfu_aug1.0_2598.1_01165.t1 | 2 | 2 | Membralin | 421 | 452 | 0.0 | 462.4 | 0.8 | 5900.0 | -4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2598.1_01165.t1 | gi|291240539|ref|XP_002740177.1| | PREDICTED: membralin-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2598.1_01165.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2598.1_01165.t1 atgaatgctgaacaagaaaacaacaacaatgatgtcagaggtcgtaacaatggagggggcagagcacagaatccattact gaatgtgcgagatcgacttttccacgcattgttttaccgtgtagctttaacctatgccagagctgttccaaagcctgtca ggagactcctggaatttgcaattcttttgaaggcattggttgtattaggtatcttggcatatatccacattgtatttgca aggacaccaattaactgcctcggccatatacaagactcatggcctcgacacggcatactgagggtggaaatagtacataa tgcatcagaaaactacagcatcattaactcatatgagaaggaatactcagattttacgaggcacttcttccacaacgacg gcactggagaggacagcaaggaggaggganaaactgagcatgtgaacttgtctgtgaccttggacaagggaagttttaaa gaagaaagtagcagtgaagaggattctcccatagagaatttggaaacggatgctaccaatgattcccaagtttcctcgtc cacccctactattaaggaagatactcagtcacatttgattgaatcatacaccttgtctgagattgaaatgctggcaaaag tagtatggccagaggaaaaatatatagtagagtatgccctagagtatggattcttaagactgtcccctaaaaccagggaa agactcaacattactgtaatgttagtcacattagacccagaaaaagatgaatgttttggtgacagtatcagtcgttttct cctggaggagtttttgggatatgatgacatactgatgtccagtatcaaacaactagcggaaaaagaagataataaaggat atttacggaatgtagtgacaggagaacactacaggtttgtcagtatgtggatggccagaagttcctatctagccgcagca ttcatcatgctggtctttactgtgtcagtatccacattgttgagatattcacaccaccagatatttatcttcatagtgga cctgttacagatgttagagatgaatgtgactatagcctttcctgcagctcccctactcactgttattcttgcacttgttg atgattcagtttctagaactgaaaatttgcaaagaattattgaaaattatacagagattccacatcagcatacaaactca ttatcagagagagattcgccaaatattccaagcacttcatcagaagtgactagtaaccagtcctatgcaagacatagaag tgttgatagtgaaatgcaaagtactctacaaaatagccatataattagagacagaagttctatagattctgatccatcca aaagtgcaatgcctagtgataatgatgtacgtctttcaagtaatagtgataattcaaattttaatgatgcatcagtgaca aaagtaacgaaaaataccaattctgatagaacggatgatagtgcaaatgggacatctgtttga |
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Protein
| Protein ID | pfu_aug1.0_2598.1_01165.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2598.1_01165.t1 MNAEQENNNNDVRGRNNGGGRAQNPLLNVRDRLFHALFYRVALTYARAVPKPVRRLLEFAILLKALVVLGILAYIHIVFA RTPINCLGHIQDSWPRHGILRVEIVHNASENYSIINSYEKEYSDFTRHFFHNDGTGEDSKEEGXTEHVNLSVTLDKGSFK EESSSEEDSPIENLETDATNDSQVSSSTPTIKEDTQSHLIESYTLSEIEMLAKVVWPEEKYIVEYALEYGFLRLSPKTRE RLNITVMLVTLDPEKDECFGDSISRFLLEEFLGYDDILMSSIKQLAEKEDNKGYLRNVVTGEHYRFVSMWMARSSYLAAA FIMLVFTVSVSTLLRYSHHQIFIFIVDLLQMLEMNVTIAFPAAPLLTVILALVDDSVSRTENLQRIIENYTEIPHQHTNS LSERDSPNIPSTSSEVTSNQSYARHRSVDSEMQSTLQNSHIIRDRSSIDSDPSKSAMPSDNDVRLSSNSDNSNFNDASVT KVTKNTNSDRTDDSANGTSV |
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