Gene
| Gene Model ID | pfu_aug1.0_2598.1_01169 |
|---|---|
| Locus | scaffold2598.1 : 51836 ... 60265 : - |
| To GenomeBrowser | scaffold2598.1:51836..60265 |
| Genes list of scaffold | scaffold2598.1 |
| Synonym | pfu_aug2.0_757.1_24374 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2598.1_01169.t1 | 2 | 1 | PIF1 | 14 | 142 | 4.3e-20 | 71.9 | 3.5e-22 | 1.3e-18 | 67.1 |
| pfu_aug1.0_2598.1_01169.t1 | 2 | 2 | PIF1 | 168 | 198 | 4.3e-20 | 71.9 | 0.41 | 1500.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2598.1_01169.t1 | gi|348501011|ref|XP_003438064.1| | PREDICTED: ATP-dependent DNA helicase PIF1-like isoform X1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2598.1_01169.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2598.1_01169.t1 atgcagtccaaagcttggcttaagtgtatccagattaatatggaattgacagaggtcaggagacagaatgacagacgatt tattgatatcttacaaagtatcaggaaaggaagatgtccagaggaaattcaagatgtcttaaaagaaacagtccggaaca atattcagaagaatggtatcttagcaacaaggttgtgtactcacaaagaagatgtagacaagatcaatgagtatcatctt ggaaaacttacaggcatatcaaagacttttgtgtctacagacagtgatacatgttacaaacagcagctagatctgttgtc ccctgtcccccacacactggaactgaaagtaggatctcaggtgatgttagcaaagaatctggatgtacagagaagtctag tgaatggtgccaggggtgtagtcataggatatgagaaaggaaatgaaggtcacccgcaggtcagatttgtctcaggtcaa gttgagaccatcaaaccgaccaggtggatatttaagattggaggaggtgctatcatctcaaggaagcagatgcccctcaa actggcatgggctatatcaatacataaaagtcagggaatgactctggattgtgtagagatgtctttatcaaaggtatttg aagcaggacagacttatgtagctttatccagagccaagagtctggaaggattacgtatattagactttgatcgcacctgt gtcagagctaactcggatgtgctgcgattttaccatagactagaattaacaaggaaaatgctccaaacaaatgttgaaga cttcttttga |
|
Protein
| Protein ID | pfu_aug1.0_2598.1_01169.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2598.1_01169.t1 MQSKAWLKCIQINMELTEVRRQNDRRFIDILQSIRKGRCPEEIQDVLKETVRNNIQKNGILATRLCTHKEDVDKINEYHL GKLTGISKTFVSTDSDTCYKQQLDLLSPVPHTLELKVGSQVMLAKNLDVQRSLVNGARGVVIGYEKGNEGHPQVRFVSGQ VETIKPTRWIFKIGGGAIISRKQMPLKLAWAISIHKSQGMTLDCVEMSLSKVFEAGQTYVALSRAKSLEGLRILDFDRTC VRANSDVLRFYHRLELTRKMLQTNVEDFF |
|