Gene
| Gene Model ID | pfu_aug1.0_2605.1_23026 |
|---|---|
| Locus | scaffold2605.1 : 45656 ... 63310 : + |
| To GenomeBrowser | scaffold2605.1:45656..63310 |
| Genes list of scaffold | scaffold2605.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2605.1_23026.t1 | 1 | 1 | CSD | 24 | 82 | 9.4e-25 | 86.1 | 1.6e-28 | 1.2e-24 | 85.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2605.1_23026.t1 | gi|325297104|ref|NP_001191560.1| | Y-box factor homolog [Aplysia californica] | 2.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_2605.1_23026.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2605.1_23026.t1 atgtccgactccgaacaacaaccggagaacgaggccgctatagaaaagaagatcatagcctcaaagatcacaggcactgt gaaatggttcaacgtgaagagcggttatggatttatcaaccgtgatgacaccaaggaggacgtatttgtacatcaaacgg ccataaccaagaataatcctcggaaataccttcgtagtgtcggggacggagagaaggtggagtttgatgtggtcgagggg gaaaagacacattga |
|
Protein
| Protein ID | pfu_aug1.0_2605.1_23026.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2605.1_23026.t1 MSDSEQQPENEAAIEKKIIASKITGTVKWFNVKSGYGFINRDDTKEDVFVHQTAITKNNPRKYLRSVGDGEKVEFDVVEG EKTH |
|