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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2605.1_23032
Locus scaffold2605.1 : 102606 ... 128655 : -
To GenomeBrowser scaffold2605.1:102606..128655
Genes list of scaffold scaffold2605.1
Synonym pfu_aug2.0_1002.1_08079

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2605.1_23032.t1 2 1 Voltage_CLC 64 114 9.3e-27 93.9 0.002 30.0 3.4
pfu_aug1.0_2605.1_23032.t1 2 2 Voltage_CLC 120 235 9.3e-27 93.9 6.3e-31 9.3e-27 93.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2605.1_23032.t1 gi|345495188|ref|XP_001604692.2| PREDICTED: chloride channel protein 2 isoform X1 [Nasonia vitripennis] 0.0

Transcript
Transcript IDpfu_aug1.0_2605.1_23032.t1
Definition-
>pfu_aug1.0_2605.1_23032.t1
atgattgggaacatgagtcaaatctatggcagatacaggcgggacttgggatcttttgcaaagctccaggccaaaaggca
gaaaaaagaaaagaaagatcttggaaaaatcgatgtgaaacccaggaattcattctttgtatttctagagcgatgtttaa
agttgagagattggattttccggacagtcggggaagactggatatttttagctttattaggagttcttatggctttgtta
agttttacgatggattatattatagaacagtgccaagaagccaaaacttggttatatgaggagctgtcattttccgttac
gttacagtattttgcctggataggttactctatactatttatactttttgccactggattcactcatcttgtttcaccgc
aggccgtggggtcagggattcccgagatgaaaacgattctaagaggagtggtattaaaagaattcctgacacttaaagca
ctgatctcaaaagttgtcggactgtgttcatccctcggcagtacactaccaatcggaaaagagggtccgtttgtgcacat
agccagtatagtggcgacattattggggaaactcacctctttcaagggaatttacgagaatgagtcccgtaggactgaga
tgcttgctgcagcctgtgctgttggagtagctgggacatttgcagctcctataggaggtattgtagcttttacaatagct
tcacttacatttcctccgggttttgggcagttcttcgcagggcagcttacagctcgacaggccatcaatgaattgtttag
taatataacatggacgacaggacaggctgaagatattaatgatgaagaaatactgagccactggaatcatcctttaacaa
atatttatgtaacgcttactctttttatagtcatgaacttagccgtcttaatagccaatgccatagctaacaagttacag
ccatccttctacgacagtatcataaaacttaaacggcttccatatttaccagatattgtgtcggcaaaagccaatgcatg
gcacgtatttgtagaggatattatggtaaaagacgtaaaatctataaagttcacatcaagttatggagagttacaagaac
ttctagaattgaccaacttcaaaagctatccattagtagactcgccagctgaaataaatgcatactacagaaaaatgtcg
gaacagagaaaagaaagcattctggaggacagaccatttatcattgatttacgtcacgctatccagggccgtatagatga
gcaggctctagccaaaactcagcgtccggaaatcaacatcgaggtggatcaagaatcgagcagtgatgatgaggtggagg
acatcgatcctcagaacctcgaagtcgacagagaagctcctcggggaactaaatatagactggttaacaccgctagtcta
gacgaagtggaattagaacctatagaaaaggcgtga

Protein
Protein IDpfu_aug1.0_2605.1_23032.t1
Definition-
>pfu_aug1.0_2605.1_23032.t1
MIGNMSQIYGRYRRDLGSFAKLQAKRQKKEKKDLGKIDVKPRNSFFVFLERCLKLRDWIFRTVGEDWIFLALLGVLMALL
SFTMDYIIEQCQEAKTWLYEELSFSVTLQYFAWIGYSILFILFATGFTHLVSPQAVGSGIPEMKTILRGVVLKEFLTLKA
LISKVVGLCSSLGSTLPIGKEGPFVHIASIVATLLGKLTSFKGIYENESRRTEMLAAACAVGVAGTFAAPIGGIVAFTIA
SLTFPPGFGQFFAGQLTARQAINELFSNITWTTGQAEDINDEEILSHWNHPLTNIYVTLTLFIVMNLAVLIANAIANKLQ
PSFYDSIIKLKRLPYLPDIVSAKANAWHVFVEDIMVKDVKSIKFTSSYGELQELLELTNFKSYPLVDSPAEINAYYRKMS
EQRKESILEDRPFIIDLRHAIQGRIDEQALAKTQRPEINIEVDQESSSDDEVEDIDPQNLEVDREAPRGTKYRLVNTASL
DEVELEPIEKA

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