Gene
| Gene Model ID | pfu_aug1.0_2607.1_30172 |
|---|---|
| Locus | scaffold2607.1 : 19 ... 19315 : + |
| To GenomeBrowser | scaffold2607.1:19..19315 |
| Genes list of scaffold | scaffold2607.1 |
| Synonym | pfu_aug2.0_397.1_23968 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2607.1_30172.t1 | 2 | 1 | RhoGEF | 44 | 72 | 9.4e-08 | 32.1 | 0.12 | 1700.0 | -1.4 |
| pfu_aug1.0_2607.1_30172.t1 | 2 | 2 | RhoGEF | 77 | 174 | 9.4e-08 | 32.1 | 7.1e-12 | 1.0e-07 | 31.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2607.1_30172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2607.1_30172.t1 atgtttgaattgaattttgctgtcacgagactgaagcagcaggctgtgcgatttgaatctatacatcaaactacaagtcc tggcagggagatggcacccatgatgaggccctatctagctagccttaatcaacagaaaaatttcgtagaaaggaaactaa gcaatctttcgtccaaaatccctcttcatcataaggtgatggaagaagtgcagagagagaaggcagcccaggagatagtt gaagcggagcnggagcgatccttctgttctcagctatggaatatcattgatggttacatgagtcctctccgggagttagg tgttatgtcaattagggacgcgaacagtctgttcccggcttatataccccagatctatgagaatcactgcttacagctga aaagaatggaagagaggctgatcaagtggaagtacagtggaatgctgggagatatcttcatcaaaatgacagactctgta gagctatgtattgcaagttttgagagagaagagagaaaggcgagtactatgaacatggagaatcaaggtgtgacagccag agggaggggtcggtaccgtccttccagctctatcgattttacagggcagcaactggacagggacaaattatttgagcaga ggacgtatcttgaatcaccgaggggacatccaggggagggaagggcgagaaatgaattacatctgtcattacaaaaactg atgtcagaaagggaccggcaaaaatatgaccatggcccatctgcatctcaaagattaggtaacggatttatgccagtctc atctgttatgggtagacaggaaagggagggtcagtacatgcaaacgatacaaagagatgaggaggaggaagaaatgaatg aattaaatcaagattttcaagaaaaccagaatttctttcagacgtcactagatcatgcatttcagaaaaatgcaatcgag gattacggtgtatatggtgacgatgatgaagataatggttacagggaagagtcacatgatcaaggtcacatgacttctaa ttttactaatgaaacacttggagattcaaaggacgtgcaaagtgatcctttttcagtaaaacaattgcattcagtggttg atcattctagacagcgctctttccagactctttttaattctgatactggttatgaatcaaagtcaaatgtgtcaaaagat attgcaaatctgcaaccaaaagtagaagaggatagacatagcatgaaagatattgaaaatctgaataaaccagaaaattt agtgccgcttagatcaaataaagcagagaggaggagacttccttccaacattgaagctcagcaatcaatgcagcgtaggg aagcagagaaagaagaaaataagagacattcttatgttcaggcagaaaagccgtctgaagatgccattgcaggagagaaa ctcccagaagctccgcaagatgattatgaacggaaatcaggatcctggaacccaagtcagcctgtctcagattctataag taaggcaaatactgagtcgaatattccctcgttacaaaatagaaactcaatctgtcttccaaccagagatgatggtgatg tgtcaaatgttaaaactgctaagaaattaccggtagtgaaaggacgctatagccaaccaaatctggaacaaatctatgca gcatcaaaaataccttctcctccagttagtccgacagagaaaagagacattaagttgtcggccaaagacacaaaaattcc gatgtactcgccaaggaaagtggaaaaaggagccaaagcagatcccatgtcaaaatccactgaggatatatatttgtaca ggaagccatacaatattatgattaaattcaataatgaaaagactgaaaatattttggaaggtatctaa |
|
Protein
| Protein ID | pfu_aug1.0_2607.1_30172.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2607.1_30172.t1 MFELNFAVTRLKQQAVRFESIHQTTSPGREMAPMMRPYLASLNQQKNFVERKLSNLSSKIPLHHKVMEEVQREKAAQEIV EAEXERSFCSQLWNIIDGYMSPLRELGVMSIRDANSLFPAYIPQIYENHCLQLKRMEERLIKWKYSGMLGDIFIKMTDSV ELCIASFEREERKASTMNMENQGVTARGRGRYRPSSSIDFTGQQLDRDKLFEQRTYLESPRGHPGEGRARNELHLSLQKL MSERDRQKYDHGPSASQRLGNGFMPVSSVMGRQEREGQYMQTIQRDEEEEEMNELNQDFQENQNFFQTSLDHAFQKNAIE DYGVYGDDDEDNGYREESHDQGHMTSNFTNETLGDSKDVQSDPFSVKQLHSVVDHSRQRSFQTLFNSDTGYESKSNVSKD IANLQPKVEEDRHSMKDIENLNKPENLVPLRSNKAERRRLPSNIEAQQSMQRREAEKEENKRHSYVQAEKPSEDAIAGEK LPEAPQDDYERKSGSWNPSQPVSDSISKANTESNIPSLQNRNSICLPTRDDGDVSNVKTAKKLPVVKGRYSQPNLEQIYA ASKIPSPPVSPTEKRDIKLSAKDTKIPMYSPRKVEKGAKADPMSKSTEDIYLYRKPYNIMIKFNNEKTENILEGI |
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