Gene
| Gene Model ID | pfu_aug1.0_2607.1_30177 |
|---|---|
| Locus | scaffold2607.1 : 68066 ... 74796 : + |
| To GenomeBrowser | scaffold2607.1:68066..74796 |
| Genes list of scaffold | scaffold2607.1 |
| Synonym | pfu_aug2.0_3438.1_29101 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2607.1_30177.t1 | 1 | 1 | GCD14 | 62 | 327 | 0.0 | 345.0 | 0.0 | 0.0 | 344.6 |
| pfu_aug1.0_2607.1_30177.t1 | 1 | 1 | Methyltransf_31 | 102 | 216 | 3.3e-09 | 36.4 | 1.1e-11 | 1.5e-08 | 34.4 |
| pfu_aug1.0_2607.1_30177.t1 | 1 | 1 | Methyltransf_18 | 102 | 196 | 4.1e-07 | 30.5 | 6.4e-10 | 8.6e-07 | 29.5 |
| pfu_aug1.0_2607.1_30177.t1 | 1 | 1 | Methyltransf_26 | 102 | 183 | 1.7e-06 | 28.0 | 2.3e-09 | 3.1e-06 | 27.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2607.1_30177.t1 | gi|40643016|emb|CAD91434.1| | hypotheitcal protein [Crassostrea gigas] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2607.1_30177.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2607.1_30177.t1 atgagttttgataattatcataaagttgtggaagaaaatgatacagttattttgtatctaggttacgaaaatatgcattc tataaaggttagaggtggacatacatttcagacgaaatatggcgcacttagacactcggacctccttgggaaaccttatg gaagtaaaatacagtgtcccaagggctatctttatgttttacatccaactcctgaactatggacacagaatttacctcac agaacccagattttatattccacagatataagcattgtgactttccaattggatgtcaggcctggatccgtagttgtaga atcaggaacagggagtggatcactgtcacacgccctcatcagatccctcctaccatccggacaccttcacacctttgaat tccacaaggaaagagcagaaaaagctgagcaagagttcaaagagcatggcctggaatcgtatgtcactgtaaatcataga gatgtgtgtcagaatggctttgatctagagcatgtggctgatgctgtatttctggatctaccagtaccttgggaagcatt accaagtgctaaaacagctttgaaaaaagaaggtggtagaatatgttccttctcaccatgtattgaacaagtacagcgga catgcgaggtcctaacagagttagggttcgaggacataagcacaatggagtgcctagtgaggaactttgacgtgaggacg gtaaatctcccaataccggacctcggaggaggtgatagcatagaaacttcaagtataaagaaggaaaaaaacactgttga cgaggaatctgataaaaagcaagaaattgtcaaatctaacactgatggtgataaatcaagtgctgagaatgctaaacaaa cgtttgactttataggaaagaaagaagataaaaatttttatttcaagtctggtgtagcacctacacaaatgccaggacat acaggctatttaacttttgcactctctatcctgcatgaatctcaatgtaaatcttgtatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2607.1_30177.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2607.1_30177.t1 MSFDNYHKVVEENDTVILYLGYENMHSIKVRGGHTFQTKYGALRHSDLLGKPYGSKIQCPKGYLYVLHPTPELWTQNLPH RTQILYSTDISIVTFQLDVRPGSVVVESGTGSGSLSHALIRSLLPSGHLHTFEFHKERAEKAEQEFKEHGLESYVTVNHR DVCQNGFDLEHVADAVFLDLPVPWEALPSAKTALKKEGGRICSFSPCIEQVQRTCEVLTELGFEDISTMECLVRNFDVRT VNLPIPDLGGGDSIETSSIKKEKNTVDEESDKKQEIVKSNTDGDKSSAENAKQTFDFIGKKEDKNFYFKSGVAPTQMPGH TGYLTFALSILHESQCKSCM |
|