Gene
| Gene Model ID | pfu_aug1.0_261.1_07445 |
|---|---|
| Locus | scaffold261.1 : 6293 ... 10365 : - |
| To GenomeBrowser | scaffold261.1:6293..10365 |
| Genes list of scaffold | scaffold261.1 |
| Synonym | pfu_aug2.0_205.1_17117 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_261.1_07445.t1 | 2 | 1 | I-set | 24 | 53 | 1.2e-09 | 37.9 | 8.4e-05 | 0.18 | 11.6 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 1 | V-set | 24 | 57 | 7.0e-08 | 32.3 | 4.1e-06 | 0.0086 | 15.9 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 1 | ig | 24 | 50 | 4.5e-06 | 26.6 | 8.9e-05 | 0.19 | 11.8 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 1 | Ig_2 | 28 | 55 | 8.8e-09 | 35.3 | 0.00023 | 0.49 | 10.5 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 1 | Ig_3 | 34 | 52 | 1.8e-07 | 31.5 | 0.00018 | 0.38 | 11.2 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 2 | Ig_3 | 70 | 150 | 1.8e-07 | 31.5 | 1.3e-06 | 0.0028 | 18.1 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 2 | Ig_2 | 74 | 154 | 8.8e-09 | 35.3 | 2.9e-08 | 6.2e-05 | 23.0 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 2 | I-set | 80 | 157 | 1.2e-09 | 37.9 | 9.2e-09 | 1.9e-05 | 24.3 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 2 | V-set | 80 | 165 | 7.0e-08 | 32.3 | 1.1e-05 | 0.023 | 14.5 |
| pfu_aug1.0_261.1_07445.t1 | 2 | 2 | ig | 81 | 151 | 4.5e-06 | 26.6 | 8.0e-05 | 0.17 | 12.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_261.1_07445.t1 | gi|189234549|ref|XP_973487.2| | 2.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_261.1_07445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_261.1_07445.t1 atgcactaccctcttactgtcgggaagttgacctttctcccggaagaagatatcagtgtagagtttaatgactttaagaa cggtgtgacggaatggaatcttgtgattaaaagagcggcacccaaacattcgggaacatacgagtgtcaaatcagcgcaa aaaagctctacacgcaccatgtctatttacacgttctagcaatacggatttcaggtacggaatatgtgaatttatacgag aaaattaaattaacctgtaatgtgacattccggtctgcaagaccaccctcgatagactggttccacgatggaaatgtgat aaaaacacaagatcctaggtggcgcaatagaattgaaataactcgtcgtgtagtacaaaaggagcgctacttgcgtagtg acctcaccattgagataagcgcgatgacagatggcggacgttatgtgtgccgtagcattgactacatgaacaacaacatt aacacggcaaatatggacgtaaacgttttaaatagtaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_261.1_07445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_261.1_07445.t1 MHYPLTVGKLTFLPEEDISVEFNDFKNGVTEWNLVIKRAAPKHSGTYECQISAKKLYTHHVYLHVLAIRISGTEYVNLYE KIKLTCNVTFRSARPPSIDWFHDGNVIKTQDPRWRNRIEITRRVVQKERYLRSDLTIEISAMTDGGRYVCRSIDYMNNNI NTANMDVNVLNSK |
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