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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_26146.1_19111
Locus scaffold26146.1 : 12596 ... 13689 : +
To GenomeBrowser scaffold26146.1:12596..13689
Genes list of scaffold scaffold26146.1
Synonym pfu_aug2.0_515.1_17510

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_26146.1_19111.t1 1 1 Na_Ca_ex 10 169 7.5e-26 90.4 1.2e-29 9.2e-26 90.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_26146.1_19111.t1 gi|115702441|ref|XP_794199.2| 0.0

Transcript
Transcript IDpfu_aug1.0_26146.1_19111.t1
Definition-
>pfu_aug1.0_26146.1_19111.t1
atgataaccatgctctggtttttcatgggcgtagctatcgtggcagatgtcttcatgtgtggaatagaaaaaattacgag
taaaacacggatagtcaaaatccccgacccagagaaaaaagatgaagtgaaaacaatagaagtgaaagtatggaacgata
ctgtcgcaaatttgagtttaatggcgtttggtacaagcgcaccggaaatactgctgtctgtcattgaaataaccggaaat
tcatttaaatccagtgatttgggtccagggactattgtcggatcagccgcttttaatctcctggtgataacaggagtctg
tattgtttcaattccaaaaggagagactcggaaaataggaaatattcctgtctatgttactacaactttatttgccatga
tggcttacatctggttgatcgtagtcctgaaggggattacaccaaacaaagtagatatatatgaggccgtgattacgttc
cttatgtttccggtcctcattttgacgtcatacgccgtagataagggatgtaaccgcagaaagacgtcatcagaactgga
agtgggaataagtaagtaa

Protein
Protein IDpfu_aug1.0_26146.1_19111.t1
Definition-
>pfu_aug1.0_26146.1_19111.t1
MITMLWFFMGVAIVADVFMCGIEKITSKTRIVKIPDPEKKDEVKTIEVKVWNDTVANLSLMAFGTSAPEILLSVIEITGN
SFKSSDLGPGTIVGSAAFNLLVITGVCIVSIPKGETRKIGNIPVYVTTTLFAMMAYIWLIVVLKGITPNKVDIYEAVITF
LMFPVLILTSYAVDKGCNRRKTSSELEVGISK

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