Gene
| Gene Model ID | pfu_aug1.0_2615.1_23033 |
|---|---|
| Locus | scaffold2615.1 : 526 ... 21359 : + |
| To GenomeBrowser | scaffold2615.1:526..21359 |
| Genes list of scaffold | scaffold2615.1 |
| Synonym | pfu_aug2.0_205.1_17113 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2615.1_23033.t1 | 1 | 1 | Glyco_transf_7N | 1 | 63 | 1.7e-27 | 95.4 | 1.4e-30 | 3.5e-27 | 94.4 |
| pfu_aug1.0_2615.1_23033.t1 | 1 | 1 | Glyco_transf_7C | 67 | 144 | 8.1e-22 | 76.4 | 7.7e-25 | 1.9e-21 | 75.2 |
| pfu_aug1.0_2615.1_23033.t1 | 1 | 1 | Misat_Tub_SegII | 300 | 395 | 2.2e-23 | 82.5 | 2.1e-26 | 5.2e-23 | 81.2 |
| pfu_aug1.0_2615.1_23033.t1 | 2 | 1 | Tubulin | 307 | 346 | 6.2e-09 | 36.0 | 0.26 | 650.0 | -0.1 |
| pfu_aug1.0_2615.1_23033.t1 | 2 | 2 | Tubulin | 420 | 577 | 6.2e-09 | 36.0 | 1.7e-11 | 4.1e-08 | 33.3 |
| pfu_aug1.0_2615.1_23033.t1 | 1 | 1 | Tubulin_3 | 448 | 632 | 7.1e-32 | 110.3 | 6.0e-35 | 1.5e-31 | 109.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2615.1_23033.t1 | gi|115703467|ref|XP_001202259.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2615.1_23033.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2615.1_23033.t1 atgctccaacgacaaaaactaaaatacaggattttcgttgttgatcaggttggcacaacaaatttcaacagaggcatgct acttaacattggttacattgaagctctgaaattagaagattttgactgtttcgttttccatgacgtggatttgattccag agaatgaccagaatttatacatgtgtgacggaagtctacgtcagttgtcgtctgccattgatgaatggagataccacgtc atatactataatagcgcgggaggtgtggtgatagtgagtaaagagacgtttctgttgatgaatggatatccaaacttgta ttggatatggggaggggaagacgacgaactctgtcttagagctaagcaccacggagtgatccttaccagaccttcagtgg acgttggaaaatacaaagcgattccccacaaaaagtccccaaaaggagatgctctataccttctaagtaagtggagtcat aggttggacacggatggactgacgtcacttcccggtagctatcggataacacagacgacgggacatgaaatgtacactaa tatatctgtggatgtgctggtggaaccagatagcgtcggtagatctgcaccaccttatctatggtgggctgactgggact tcatcatatgaaacattgacattgacgatcctgataattttaaggtcaaattgaaaaggagcattgtgtataaattttat tctcggttctatgaagtgaaaattaatggactggactttaatatgtcggaaatggacctgtcccattttacccaacatga ctgctctgcagcggcatctgtaccatgcagtattgtgttaagcatcctcagacagaacatccacacaagtttggttgacg taggatttaaagcaaggcaggaatcctcgtttgtgtatgatgcatcttcaaatgatgcaaaacaaagggacataaatcat gatgtattgttcagagaggggagaaccagacagggacatgtcacatttacacccaggctagtggcatttgacttaaaagg aagcttacagtctcttaaaagggaaggaactctttatgaagtatccaaccaatcagaacaagaagaaattcagtggtcag gggatgtaactcttcatcagacttcctcagcctctgttaacccatacatacaggatctcagaaaagaggaagagagtgta cttcatggagacgaggacacggacaaatcacagaccatagaggatgtggatatgaaagattcagcacgtacaaataacgg ctcttcaaagtcttctagcactggagtagtctttgggaagccttactataaccttgatggcagtgtaaaagtatggtctg attacctgaaggtacatctacatcctaggtccatacatgtggtagaacagtatactatgtcagatgagttacatcccttt gatgtttacggttgtggggaggaggtgatgagggactatgacactcgtcaggagatggaagaccgaattcaatatttcac cgaagagtgtgaccaacttcaggggttccacgtattactggacacctataacggttttggaggtctgggatcttctattt tacaatacctagaggacgagtacagctctaaaggtgttatgacgtttggtttgactccctccagcctcaaagatgacact gcccaactgagagctgacagaatcatcaactcagcaattacatactctaagtgctcttctcatagttccctgtattttcc tctttctatagcccagggcttgtggaagacaataggtcctcccatcccctttcatcacttacagtataagaatatagatt accataccagtgccattcttgctgccgctttggagacggcaacgttgccatggagacataactcaccaattcatatcagg gacgtcactgataacttctcagtgttgggtagaaagcttgcctcaatcagtacctctcttcccttccctgtgaggacaga cggagatttgatgaaatcacttcaaagtttaggagataggttaccatggcaatctgtaactccacatggtcagaatgaat tacctccctttatacagtcagtggtattacgaggtgtagatccaagattcactgccagtagacctacaaatgaaagtatt tatcaatcaagtaacacagtagaagatattgtacagacatatctgacggaaaagtttccctcctgtacaaatgggagctg tatatccggagaacgcagtcatgtaaccacaccttttcctcatattttcaataagaatgtcaacaaacaaggatttctat cagataaactcagggaggaatatgaaggtgttgacgctgttcccatgatgacatccatgcagtctacagaggatatgggt aaactactgtacactctacacagctctgctgctaaactgaacatcaagaaacacactcgcttcctggaggcggggctcga agaggacgagtatagaaacattatacaagaattacaagcgctagaacagtgttataacagtaaagatgacatgggctga |
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Protein
| Protein ID | pfu_aug1.0_2615.1_23033.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2615.1_23033.t1 MLQRQKLKYRIFVVDQVGTTNFNRGMLLNIGYIEALKLEDFDCFVFHDVDLIPENDQNLYMCDGSLRQLSSAIDEWRYHV IYYNSAGGVVIVSKETFLLMNGYPNLYWIWGGEDDELCLRAKHHGVILTRPSVDVGKYKAIPHKKSPKGDALYLLSKWSH RLDTDGLTSLPGSYRITQTTGHEMYTNISVDVLVEPDSVGRSAPPYLWWADWDFIIXNIDIDDPDNFKVKLKRSIVYKFY SRFYEVKINGLDFNMSEMDLSHFTQHDCSAAASVPCSIVLSILRQNIHTSLVDVGFKARQESSFVYDASSNDAKQRDINH DVLFREGRTRQGHVTFTPRLVAFDLKGSLQSLKREGTLYEVSNQSEQEEIQWSGDVTLHQTSSASVNPYIQDLRKEEESV LHGDEDTDKSQTIEDVDMKDSARTNNGSSKSSSTGVVFGKPYYNLDGSVKVWSDYLKVHLHPRSIHVVEQYTMSDELHPF DVYGCGEEVMRDYDTRQEMEDRIQYFTEECDQLQGFHVLLDTYNGFGGLGSSILQYLEDEYSSKGVMTFGLTPSSLKDDT AQLRADRIINSAITYSKCSSHSSLYFPLSIAQGLWKTIGPPIPFHHLQYKNIDYHTSAILAAALETATLPWRHNSPIHIR DVTDNFSVLGRKLASISTSLPFPVRTDGDLMKSLQSLGDRLPWQSVTPHGQNELPPFIQSVVLRGVDPRFTASRPTNESI YQSSNTVEDIVQTYLTEKFPSCTNGSCISGERSHVTTPFPHIFNKNVNKQGFLSDKLREEYEGVDAVPMMTSMQSTEDMG KLLYTLHSSAAKLNIKKHTRFLEAGLEEDEYRNIIQELQALEQCYNSKDDMG |
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