Gene
| Gene Model ID | pfu_aug1.0_26161.1_11754 |
|---|---|
| Locus | scaffold26161.1 : 1 ... 4025 : - |
| To GenomeBrowser | scaffold26161.1:1..4025 |
| Genes list of scaffold | scaffold26161.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_26161.1_11754.t1 | 2 | 1 | Kelch_5 | 3 | 42 | 2.9e-12 | 46.2 | 2.2e-07 | 0.00046 | 20.0 |
| pfu_aug1.0_26161.1_11754.t1 | 3 | 1 | Kelch_3 | 3 | 14 | 6.0e-07 | 29.4 | 0.16 | 330.0 | 1.6 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 1 | Kelch_2 | 5 | 49 | 8.0e-08 | 31.7 | 1.5e-05 | 0.033 | 13.9 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 1 | Kelch_6 | 6 | 50 | 8.0e-12 | 44.7 | 1.0e-08 | 2.2e-05 | 24.4 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 1 | Kelch_1 | 6 | 49 | 2.1e-11 | 43.1 | 7.3e-08 | 0.00015 | 21.1 |
| pfu_aug1.0_26161.1_11754.t1 | 3 | 2 | Kelch_3 | 15 | 65 | 6.0e-07 | 29.4 | 3.5e-05 | 0.074 | 13.2 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 2 | Kelch_5 | 56 | 83 | 2.9e-12 | 46.2 | 7.4e-09 | 1.6e-05 | 24.7 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 2 | Kelch_6 | 63 | 81 | 8.0e-12 | 44.7 | 5.7e-07 | 0.0012 | 18.9 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 2 | Kelch_1 | 63 | 96 | 2.1e-11 | 43.1 | 6.4e-08 | 0.00014 | 21.3 |
| pfu_aug1.0_26161.1_11754.t1 | 2 | 2 | Kelch_2 | 63 | 93 | 8.0e-08 | 31.7 | 2.7e-06 | 0.0057 | 16.3 |
| pfu_aug1.0_26161.1_11754.t1 | 3 | 3 | Kelch_3 | 69 | 96 | 6.0e-07 | 29.4 | 0.0001 | 0.22 | 11.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_26161.1_11754.t1 | gi|159474968|ref|XP_001695595.1| | kelch repeat protein [Chlamydomonas reinhardtii] | 4.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_26161.1_11754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26161.1_11754.t1 atgaaccctctgggacggagtagtcacggtctagttgtaataggcaaccacgcctacgtctacggcggggaaaacaagcc tcgtgtgcctatagacaataacatgaactgcttagacctgaaaagtctatcctggagcgtgtgcgaacctaaaagcaaag attacattccaagcccagttaacgcagcatcggtggcagcggtgggatccaagatttatgtgttcggtgggcgcacaggg gtcgacatgggtcagggagacacggaccagatggacgtgttcgatacgacggaactgg |
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Protein
| Protein ID | pfu_aug1.0_26161.1_11754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26161.1_11754.t1 MNPLGRSSHGLVVIGNHAYVYGGENKPRVPIDNNMNCLDLKSLSWSVCEPKSKDYIPSPVNAASVAAVGSKIYVFGGRTG VDMGQGDTDQMDVFDTTEL |
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