Gene
| Gene Model ID | pfu_aug1.0_26186.1_62417 |
|---|---|
| Locus | scaffold26186.1 : 1426 ... 5797 : + |
| To GenomeBrowser | scaffold26186.1:1426..5797 |
| Genes list of scaffold | scaffold26186.1 |
| Synonym | pfu_aug2.0_509.1_30841 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_26186.1_62417.t1 | 5 | 1 | NHL | 56 | 68 | 1.6e-07 | 30.8 | 0.54 | 4000.0 | -1.9 |
| pfu_aug1.0_26186.1_62417.t1 | 5 | 2 | NHL | 98 | 111 | 1.6e-07 | 30.8 | 0.86 | 6400.0 | -2.6 |
| pfu_aug1.0_26186.1_62417.t1 | 5 | 3 | NHL | 166 | 182 | 1.6e-07 | 30.8 | 0.021 | 150.0 | 2.5 |
| pfu_aug1.0_26186.1_62417.t1 | 5 | 4 | NHL | 207 | 229 | 1.6e-07 | 30.8 | 5.0e-06 | 0.037 | 13.9 |
| pfu_aug1.0_26186.1_62417.t1 | 5 | 5 | NHL | 255 | 276 | 1.6e-07 | 30.8 | 5.1e-05 | 0.38 | 10.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_26186.1_62417.t1 | gi|50949307|emb|CAB53687.2| | hypothetical protein [Homo sapiens] | 6.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_26186.1_62417.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26186.1_62417.t1 atggagttagagaacgaatttgaagccagagttgaaagtgatggtcttttgggagtgagttgctcgggatcagacacagc atggatgagggcagtcacacccacactattccttataaggcagacgggggaggtcgtggagagcgtcaatactcaaacag gaacatacccaaacgacatcttcgttacagaggatgacgaggtactttttactgacccccagaataaatgcataacgaga ataacaaaagaccgtgaagtaagaccgtggaccaaaccaggcgagttcactcccttgagcttgtattgtacacgagatgg gtttgtaatagtctctctctcattagaaacccgatcaagcgaaagcagtgacgttatcaccacggctaaagttgttaaat ttgattccaagggagagcctgttttagaaataaaagatgacataaatggtaagtccctgtacaagtatccggagtaccta tctgtaaatacaaataacgcatcggatttatgtgtctccgactggggaagtaagtctgtagttgttgttaatcagtctgg ggaacatcgattcacttttgaaggcccgccaaaaagcagcagacgttatcctgaatttttcccgcgggatctggtttgcg attcagaagggaggatcctgatagttgatagtggaaacgaatgcatacacatgctaaattctaacggagaatttctgtct tatttactcacagacgatgatggaatagaggatccgtttacgttaagtattgataccacaggtcgtctgtgggttggaga aagacactcaaagaaggttaagattttcaaacattcttcttag |
|
Protein
| Protein ID | pfu_aug1.0_26186.1_62417.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26186.1_62417.t1 MELENEFEARVESDGLLGVSCSGSDTAWMRAVTPTLFLIRQTGEVVESVNTQTGTYPNDIFVTEDDEVLFTDPQNKCITR ITKDREVRPWTKPGEFTPLSLYCTRDGFVIVSLSLETRSSESSDVITTAKVVKFDSKGEPVLEIKDDINGKSLYKYPEYL SVNTNNASDLCVSDWGSKSVVVVNQSGEHRFTFEGPPKSSRRYPEFFPRDLVCDSEGRILIVDSGNECIHMLNSNGEFLS YLLTDDDGIEDPFTLSIDTTGRLWVGERHSKKVKIFKHSS |
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