Gene
| Gene Model ID | pfu_aug1.0_262.1_65324 |
|---|---|
| Locus | scaffold262.1 : 35456 ... 42131 : + |
| To GenomeBrowser | scaffold262.1:35456..42131 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug2.0_42.1_06815 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_262.1_65324.t1 | 1 | 1 | RVT_1 | 26 | 113 | 2.4e-16 | 59.7 | 3.4e-20 | 5.1e-16 | 58.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_262.1_65324.t1 | gi|326672963|ref|XP_003199767.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_262.1_65324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_262.1_65324.t1 atgaaaagtggatatcaccagatcgaaatgtatgaaccacacaaggaacgaactgcgttcaccgtaggaccattggggtt ttacgaattcaacagaatgccgttcggtttggtgaatgcacccgctacgtatcaacggctaatggaagaatgttttcagg gactgcatttagatatctgctacatctacttagacgacatagtcatcttttcgaaaacatttgaggaacatatggaacgt ctagaaaaagtatttaaaagatttcgagaggttaatctgaaattatctccgaagaagtgtgacctgttcaagagaaaagt ctgttatgttggacacattgtatctcaagaaggaatcgaaccagatccgaagaaaatcgaaaaagttcgtcagtggccac agccatcaaatccagacgaagtccgtaaatttttggggttcgttggatactataggagattcatccaaaatttttccaag atatctcgacctttagcagacttgatcgttgaaccaacaaagaaagcaagaagaaagtctaaaaacagtttcaaaccgga caagtgggaatgggggaaggagcaagaaaccgcattcaatctgcttaaagacaaacttacatcttttcccattcttggat acccagatttcagcaaaccgttcgagttacacactgacgcatcgacaaaaggtctaggagctattctttatcaagagcag gatggcgtcaaacgagttatcgcatacgcaagcagaggattgacgaaatcagagcgtaactatcccgtacacaagctcga gttccttgcgttgaaatggtcaatttcagagaaattttatgactatttatatggaaacacattcagcgtctttaccgaca ataacccacttacttacatcctttcatctgcaaaattggatgcgactggtcaaagatgggttgcttcgctagcatcattc aacttctccatcacttaccgttctggacatcacaacagggatgctgatgcgttatcacgtttaccaggaatcatagaaga actgaaaaatgccgtcaatggttataatgatgttcagatcgagttaccatatcatgcccattatagctatagcagtcttt tcctcgagaatggatgttga |
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Protein
| Protein ID | pfu_aug1.0_262.1_65324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_262.1_65324.t1 MKSGYHQIEMYEPHKERTAFTVGPLGFYEFNRMPFGLVNAPATYQRLMEECFQGLHLDICYIYLDDIVIFSKTFEEHMER LEKVFKRFREVNLKLSPKKCDLFKRKVCYVGHIVSQEGIEPDPKKIEKVRQWPQPSNPDEVRKFLGFVGYYRRFIQNFSK ISRPLADLIVEPTKKARRKSKNSFKPDKWEWGKEQETAFNLLKDKLTSFPILGYPDFSKPFELHTDASTKGLGAILYQEQ DGVKRVIAYASRGLTKSERNYPVHKLEFLALKWSISEKFYDYLYGNTFSVFTDNNPLTYILSSAKLDATGQRWVASLASF NFSITYRSGHHNRDADALSRLPGIIEELKNAVNGYNDVQIELPYHAHYSYSSLFLENGC |
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