Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2623.1_51748
Locus scaffold2623.1 : 18179 ... 30915 : -
To GenomeBrowser scaffold2623.1:18179..30915
Genes list of scaffold scaffold2623.1
Synonym pfu_aug2.0_167.1_23592

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_2623.1_51748.t1
Definition-
>pfu_aug1.0_2623.1_51748.t1
atgagcatggacacaactactctactagctcatcatacgggtctcactactcaagtcattccccctagtagtatggtcag
cagtcaacaggatggtgcacctagtaatgtagtcaacagtcaacagaacggagaagtcaatactctgccgaccagttcag
tcaataatcaccttgccagttcagtcagttctcagcaaaccagttcagttgatgatcaatgcaataatatggatactgat
caaaacgctgatttagaaaattatcggcagaccaacacagtgaccattcaggaaaacaatgccttgcagaatcagcttaa
taatacagcgaccagtcagtatacgtgcaactatacgacgcggagctcaagcagtgaggattcccagctacaggagacgg
cacagtcactgatggcttccatgtctaccaatatgattaaaatcctcgatgattgggaggaagaggaagaagagtttgat
ggaccaatgacgatagagaatttctgtacaaagttcctgaaagtgcctctaccctgccagttttggcgtaatagtaataa
aagaaggcggagcagtatagctagtgcgccagtggagttggaatgcggggatgtttggagtgaattgggggcatctgtaa
tacacggatcgtatgtggaggcatgccacaaaatactgcaggaagccttggctaatgctgattgtcgagctagggataga
gagaaatttgaggagaagtttttgtcagaccctccagactgggtgaaggaagcactgactgtcacgtctgaggaagggaa
aatacaactaaaggagaaagtagcagagttgtcgtcaatgtgtaatagcatggcaagaaagcttcatcataaagaaatca
aataccaggcatctactgcctactgtaatatactacagaataagttggaagaactcaagagcaaattgcagatcaaatca
gaagtttcctcaaaagcaaaagaatttctggattcacttaatgaagaggaagccagactagatgatatcttgtcagccgg
tacacacgaagaagaagtcaatatggaggatgcgtcagctgaaatcgaagaaaacaagaagaaaatggatgagttggcca
aaattgaagaggaattaaaaagagaactggaggagttggagcaaagagcgggtaaatctgacaacaagctgtcacagtta
cggctggaatcgtcggacaaggaggaagatgtagatttcagtacagagagaaatgatttacaagccgatatcaatacgct
ggagaatctgacagagtggatttggcagcgtgaggagagtgatgaagagtcggagcttttcctgttttatgacgccacaa
tagctgtgatcatagataaagtaccgggttccactaatggaaatatcaaaatcaggaagatacagctgtattccttgtta
gaagatgacaatgaatgtacaccatcttcaattgatttaatgaagatggctaaaaaaaagatagcgcacaatttgttaat
gaaggcaatcaacacagacaaactatgtgagaagtacaagagttgggattcactacctgatctgttacatgaactttcca
tcatcatcattgatacgaagaccttgatatcagatctagacagagctgggcttatagacaatgtactactaacatggaat
atatcagaatgctgtgcaatttatgagaagtggtcactgacacagcttaggaaaatcacgattacaatcaagcttatagt
agagggacattctgttaagactgtaccacaagtccatgtgaagtatgggaaattcagtaaccaagatgtgatgaaggtga
ttcagaaggtggatcaaggtgtaaattatgcagaaagactatgtcaggcgatcgatttagaggacttggacagtttacct
gattactgtagcacttag

Protein
Protein IDpfu_aug1.0_2623.1_51748.t1
Definition-
>pfu_aug1.0_2623.1_51748.t1
MSMDTTTLLAHHTGLTTQVIPPSSMVSSQQDGAPSNVVNSQQNGEVNTLPTSSVNNHLASSVSSQQTSSVDDQCNNMDTD
QNADLENYRQTNTVTIQENNALQNQLNNTATSQYTCNYTTRSSSSEDSQLQETAQSLMASMSTNMIKILDDWEEEEEEFD
GPMTIENFCTKFLKVPLPCQFWRNSNKRRRSSIASAPVELECGDVWSELGASVIHGSYVEACHKILQEALANADCRARDR
EKFEEKFLSDPPDWVKEALTVTSEEGKIQLKEKVAELSSMCNSMARKLHHKEIKYQASTAYCNILQNKLEELKSKLQIKS
EVSSKAKEFLDSLNEEEARLDDILSAGTHEEEVNMEDASAEIEENKKKMDELAKIEEELKRELEELEQRAGKSDNKLSQL
RLESSDKEEDVDFSTERNDLQADINTLENLTEWIWQREESDEESELFLFYDATIAVIIDKVPGSTNGNIKIRKIQLYSLL
EDDNECTPSSIDLMKMAKKKIAHNLLMKAINTDKLCEKYKSWDSLPDLLHELSIIIIDTKTLISDLDRAGLIDNVLLTWN
ISECCAIYEKWSLTQLRKITITIKLIVEGHSVKTVPQVHVKYGKFSNQDVMKVIQKVDQGVNYAERLCQAIDLEDLDSLP
DYCST

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495