Gene
| Gene Model ID | pfu_aug1.0_2625.1_30184 |
|---|---|
| Locus | scaffold2625.1 : 3356 ... 12874 : + |
| To GenomeBrowser | scaffold2625.1:3356..12874 |
| Genes list of scaffold | scaffold2625.1 |
| Synonym | pfu_aug2.0_39.1_30060 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2625.1_30184.t1 | 1 | 1 | ATG27 | 226 | 269 | 5.9e-07 | 28.9 | 1.4e-10 | 1.0e-06 | 28.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2625.1_30184.t1 | gi|196002101|ref|XP_002110918.1| | predicted protein [Trichoplax adhaerens] | 2.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2625.1_30184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2625.1_30184.t1 atgaatttagataggagggcttttatcatacaatatccacttaagttatcaatattgcctctcatcatcagtatcatcag tattatacacaatgaaagtcccgtgatagctgaagatcaatgtaaatcgcctcagggaatcgacatcaccattttgaaac aaggaatatggagtttcagcagcaaaacaggctgtctgggagtgaacaccacatctccattttcaaactgtacgatatcc atatcattctgtcagcctttaccggcaaactggtgtggacaacagtcaaatgatcttagtgtttgtgttaaaaccttcaa tggcactggacagaatgaaaccatatcttatgctggagggagcttcaatccacagccattcgcattagattttaccatcg gaggagggttccaagccacttttggtgccacgccttacaccccacctggtggatcagctaccaatatcacatcacaggca atgtttatatgtaaccagaattcagtatggtcaccggctctcataggatctataaataacacaatcccagacatcgcaaa acctagtattgttttcaaagatggtcatagcttatcaatgacttttgagtactacggagcatgtgtcactttaacaccag cagaaaaattgaaccttctcagtgcaggatcagttctaatcataatattttttgtcagtttgactatctactttttattt ggatctgtctttaactattgccgtggttacaggggaaaggatgtgattccccaatcagaattctgggttgacttgccagt attagttgcagtaagtatgatatag |
|
Protein
| Protein ID | pfu_aug1.0_2625.1_30184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2625.1_30184.t1 MNLDRRAFIIQYPLKLSILPLIISIISIIHNESPVIAEDQCKSPQGIDITILKQGIWSFSSKTGCLGVNTTSPFSNCTIS ISFCQPLPANWCGQQSNDLSVCVKTFNGTGQNETISYAGGSFNPQPFALDFTIGGGFQATFGATPYTPPGGSATNITSQA MFICNQNSVWSPALIGSINNTIPDIAKPSIVFKDGHSLSMTFEYYGACVTLTPAEKLNLLSAGSVLIIIFFVSLTIYFLF GSVFNYCRGYRGKDVIPQSEFWVDLPVLVAVSMI |
|