Gene
| Gene Model ID | pfu_aug1.0_2625.1_30185 |
|---|---|
| Locus | scaffold2625.1 : 14834 ... 19255 : - |
| To GenomeBrowser | scaffold2625.1:14834..19255 |
| Genes list of scaffold | scaffold2625.1 |
| Synonym | pfu_aug2.0_39.1_30059 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2625.1_30185.t1 | 1 | 1 | RIO1 | 1 | 92 | 1.7e-24 | 86.2 | 9.2e-28 | 2.7e-24 | 85.5 |
| pfu_aug1.0_2625.1_30185.t1 | 1 | 1 | APH | 36 | 73 | 6.2e-06 | 26.1 | 2.9e-09 | 8.7e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2625.1_30185.t1 | gi|149047084|gb|EDL99804.1| | RIO kinase 2 (yeast), isoform CRA_c [Rattus norvegicus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2625.1_30185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2625.1_30185.t1 atggaattgctcagcggtcatacattttgtaacgtgaaggagatagggaatccgtctctggcgtatgatgactgtatgaa cctgatactaaggctcgctaactgtggggttatacatggtgactttaatgaatttaaccttatgatagacgatgatggcc acgttaccatgatagattttcctcagatggtatccacctcacatcccaatgctgaatggtatttcaacagagatgtcaac tgcataagagaattttttgcaagacggtttcactatgagagtgaactttatccaaagttctcagatgtaagtcgtgatga tgatctagatgttgaggtatcagctagtggctttaccaaagagatggcagaatcatttgacgaggcagcagatgaattca acatcaggggaggacctgactgtgagaagtcgcatgattcaaatgaccaatcaaattctgaggaagaggaggagctacca gatcatccaacagaaacaaaggatccgattggtgaacccacgaatgaggtcacctctgacattgaagaatcgaaatttga agatgcagtgaaaattgaagatagtgagagagatgaaacacagagatctgttagactttgtgaggaacaaacagaacttg cagaaaaagtgaatgacagctgtgattcagaggagaagagatag |
|
Protein
| Protein ID | pfu_aug1.0_2625.1_30185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2625.1_30185.t1 MELLSGHTFCNVKEIGNPSLAYDDCMNLILRLANCGVIHGDFNEFNLMIDDDGHVTMIDFPQMVSTSHPNAEWYFNRDVN CIREFFARRFHYESELYPKFSDVSRDDDLDVEVSASGFTKEMAESFDEAADEFNIRGGPDCEKSHDSNDQSNSEEEEELP DHPTETKDPIGEPTNEVTSDIEESKFEDAVKIEDSERDETQRSVRLCEEQTELAEKVNDSCDSEEKR |
|