Gene
| Gene Model ID | pfu_aug1.0_2625.1_30186 |
|---|---|
| Locus | scaffold2625.1 : 25206 ... 40975 : + |
| To GenomeBrowser | scaffold2625.1:25206..40975 |
| Genes list of scaffold | scaffold2625.1 |
| Synonym | pfu_aug2.0_39.1_30058 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2625.1_30186.t1 | 1 | 1 | Serinc | 29 | 428 | 0.0 | 350.5 | 0.0 | 0.0 | 346.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2625.1_30186.t1 | gi|19173752|ref|NP_596886.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2625.1_30186.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2625.1_30186.t1 atgtatcaagaaatatggtatctttaccgattttatgaccctactggtcgagcagatatttccgaactgaaggttcccca gttcaaccatacctgtgtgacgttaatggcaggagagaagtgtagtcgactgacaggatatcaagcggtgtatagactgt gtttggggatggtagctttcagtgtgataatgatgctcgttactatgtgtgtccattcaagctcatactgtaggggagga atacataatgggtactggttctggaagattttgttgctgattggctgctgcacaggatccttttttgttcctcatgattt tagactctattggatgtatgttgggatggtagcgggcttcatcttcattattttccagctgattttactcgtggacttct cacactcatggaacgctaaatgggttggaacaaaaacgggagaaccaagtaaaattggatactgtggtacactatttttt gctattctattttacatcattagtatagctgcggtcttcatgctttatttgaagtacacaagttgggatggatgtcttca taacaaagtttttataggagtaaatgcaggactgtgtattttactgtctgtgatcagcataattcctggagttaccaagt tcaaccctaacgttggtatacttcaggcctcaatcatcaccacttacgtcatatacttgacatgggcagcactatccagt gaaccaccagaggaaatctccatcttagaaacagtacgtgttcagtttcttgctctatatgataaagactctgagaagaa gaaacacgatgatatgatgacggtagagggaccagacgagaatttccatgttaaatctaacacgacagctactatgtgcc accccatgccgtcattccctcacagtgatctgatagcggcctatgctggactgctcatcatgttcattatggctgtatac tcaagcttacagacatctgtagtgtcacatagactgggtgtaaggagacaaggggctaatcactcggagaaaggaggtca gagagttgagtataatgaagccagacatacccagtataattatgccttcttccactttatgttctgtcttgccagtctct acgtcatgatgcagctaactaattggtacaggccacaagagtctgacctgaacaagtttggtttgaactggtcagcagtt tgggtgaaaatggcctccagctgggcttgtgtggtcatttatatatggacactgttcattcctaagtgctgccctggtcg tgacctgaccttcatgagaaggtcatccactaggagatctgaggacgaggcagatggagaagcggaggtagacgccctac agagggagacaccggtttga |
|
Protein
| Protein ID | pfu_aug1.0_2625.1_30186.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2625.1_30186.t1 MYQEIWYLYRFYDPTGRADISELKVPQFNHTCVTLMAGEKCSRLTGYQAVYRLCLGMVAFSVIMMLVTMCVHSSSYCRGG IHNGYWFWKILLLIGCCTGSFFVPHDFRLYWMYVGMVAGFIFIIFQLILLVDFSHSWNAKWVGTKTGEPSKIGYCGTLFF AILFYIISIAAVFMLYLKYTSWDGCLHNKVFIGVNAGLCILLSVISIIPGVTKFNPNVGILQASIITTYVIYLTWAALSS EPPEEISILETVRVQFLALYDKDSEKKKHDDMMTVEGPDENFHVKSNTTATMCHPMPSFPHSDLIAAYAGLLIMFIMAVY SSLQTSVVSHRLGVRRQGANHSEKGGQRVEYNEARHTQYNYAFFHFMFCLASLYVMMQLTNWYRPQESDLNKFGLNWSAV WVKMASSWACVVIYIWTLFIPKCCPGRDLTFMRRSSTRRSEDEADGEAEVDALQRETPV |
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