Gene
Gene Model ID | pfu_aug1.0_26261.1_11765 |
---|---|
Locus | scaffold26261.1 : 10273 ... 13615 : - |
To GenomeBrowser | scaffold26261.1:10273..13615 |
Genes list of scaffold | scaffold26261.1 |
Synonym | pfu_aug2.0_5107.1_26035 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_26261.1_11765.t1 | 1 | 1 | DUF4371 | 184 | 425 | 1.4e-33 | 116.4 | 4.8e-37 | 2.4e-33 | 115.6 |
pfu_aug1.0_26261.1_11765.t1 | 1 | 1 | Dimer_Tnp_hAT | 755 | 815 | 6.6e-07 | 28.8 | 3.2e-10 | 1.6e-06 | 27.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_26261.1_11765.t1 | gi|221113187|ref|XP_002164551.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_26261.1_11765.t1 |
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Definition | - |
>pfu_aug1.0_26261.1_11765.t1 atgttacaaaacgaaagacgacccccaggtgatgatggctctccacagaaacctgcacggaagaaagttcttcagcctaa aattgatttcatgttctccaaacagtgtaaagatgatgataaaatgacttcaaactcctgttttaaacaaacaactcctg tcgaagcatcaggtgaaccagattcattcttttcatcgtcatctacttgtgatcaaacaacaaatccaccaaacacaaga gagtctgatacaccgtgtaactttgatgtgagcggtccagtaattataacctttggtagcaaacctacggaatccatgaa tgatgaatcgaagcattcacttatcacaaatagattacccccaaaatcctataaatttccaaccaaatcatattcagaca aaaagaagaagagcggtgtaagacttcggtcttgccagcatcaatggtttcagcaatttgactttatatcatattctgcc aatgaagacggtttgtactgccttgcatgtattctttttcccaaggagggtctacgtccaaaacaactgatatctgagcc ctacaggaactggaaggacgccatttcggacttaaaaaatcactcatcttgcacatatcataagaattcgatgactgtat tgaagcaatttatgaagacataccatgatccctcttcaagaattgactctattttggatgaaaaattgcaagctcaggtt tctaagaatcgagagatcataacaactgtgttgaaatgcatagcgttttgtggacgtcaaggcattcccttacgctcaca tagagacgatgatacaatggaaggaggagtcaatatggggaacctaaaggaaattctgcatctttgtgctaacatgggaa acagttctttgaaggagcatttaaaatcatgtgcaaagaatgccaaatattcatctaaaactatacaaaatgagttgctt gattgtatcaaattatttttgcaacaagagataataagacgagtaaaacaccagagttgtattgacgtatttggtattca agcagacgaggttaccgatgtcagtaacacagagcaactaggtattgtcttgagatacctcgaaagcgaccagcctgtgg aaagactcgtggaatacattgcctgtgactcaattacaggagaggcaatctcacacagcattctaggagtgataagcaac ctgggtttggacatgggaaaatgtcgctctcaatcctacgatggggctggtaatatggcaggtgctcataaaggatgtgc aagtagaattcagagggagtacccgaaggcagactacttctattgcatgaatcatgatttgaatttggcagtttcgaaat catgtcatcttccagaaattcaaattatgttagacacttgcaaacagttaggactgtttttcaaatactctccaaagagg cagggagctcttcaaatggctattaacgacgtgaactcaagaagaaaagttgatggatcaaaagatgagataagtaccac taaagttaaaacactttgcgaaacacgttgggtggaaagacatacaacggttgagagcattgcacattcgtatgagggta tagctgattgcttggcaacaattgcctctggtggtaaagaatgggacacaaaaagtgtaacagagtcgaatggcttgctg gtgaatatctgcagctcaaaatggattgttggtatccaggtttatctgaagttttcgggttacctcaaaacactcagtca actcctgcaaggtccaacaagagatattattacagcacatgaaaaggtcactcttgtaaaagaagaatttgaaagcttaa gaaaaacatgtgatgtgacattcactgaagtatggaaagaagcagagagaatggcagaagagacgtcgtctcaattaaac aagccaaggacatgcactagacagacaaaaagaagtaatgtagaggcagattcagcagaggaattcttcagacgatcagt cttcataccgtatctggaccacctcatatctgagttgcagtcacgctttactagtgcaagagcaacagtgtcaagatcac ttggactaattccagcttatgtgagcgacctagatgacaaacagactttaagcatggagcagtattttgggtccgactta cccagtaaggagtctttcagacaggaagtaaacctatggaaaagagagtggtcagagaaggagccgccaatccctaatac tttgacgtctactctcatgtccatgaattgcgccttctatccaaatatttcgactattctacgattattgttggtaatgc atgtctcagctgcctatgtagaaaggtgccactctgctcttaaggatataaaagccaagaaaaggagcacaatgtccgaa gatcgtctgaacgctttactgcttctctttgtgcacagagatatatctttggagtatgacaaaattgtggacatgtttgc tgcagcacatccacgtagaatgagacttgtcaaccctttgtcgcaattggactaa |
Protein
Protein ID | pfu_aug1.0_26261.1_11765.t1 |
---|---|
Definition | - |
>pfu_aug1.0_26261.1_11765.t1 MLQNERRPPGDDGSPQKPARKKVLQPKIDFMFSKQCKDDDKMTSNSCFKQTTPVEASGEPDSFFSSSSTCDQTTNPPNTR ESDTPCNFDVSGPVIITFGSKPTESMNDESKHSLITNRLPPKSYKFPTKSYSDKKKKSGVRLRSCQHQWFQQFDFISYSA NEDGLYCLACILFPKEGLRPKQLISEPYRNWKDAISDLKNHSSCTYHKNSMTVLKQFMKTYHDPSSRIDSILDEKLQAQV SKNREIITTVLKCIAFCGRQGIPLRSHRDDDTMEGGVNMGNLKEILHLCANMGNSSLKEHLKSCAKNAKYSSKTIQNELL DCIKLFLQQEIIRRVKHQSCIDVFGIQADEVTDVSNTEQLGIVLRYLESDQPVERLVEYIACDSITGEAISHSILGVISN LGLDMGKCRSQSYDGAGNMAGAHKGCASRIQREYPKADYFYCMNHDLNLAVSKSCHLPEIQIMLDTCKQLGLFFKYSPKR QGALQMAINDVNSRRKVDGSKDEISTTKVKTLCETRWVERHTTVESIAHSYEGIADCLATIASGGKEWDTKSVTESNGLL VNICSSKWIVGIQVYLKFSGYLKTLSQLLQGPTRDIITAHEKVTLVKEEFESLRKTCDVTFTEVWKEAERMAEETSSQLN KPRTCTRQTKRSNVEADSAEEFFRRSVFIPYLDHLISELQSRFTSARATVSRSLGLIPAYVSDLDDKQTLSMEQYFGSDL PSKESFRQEVNLWKREWSEKEPPIPNTLTSTLMSMNCAFYPNISTILRLLLVMHVSAAYVERCHSALKDIKAKKRSTMSE DRLNALLLLFVHRDISLEYDKIVDMFAAAHPRRMRLVNPLSQLD |