Gene
Gene Model ID | pfu_aug1.0_2637.1_30194 |
---|---|
Locus | scaffold2637.1 : 4106 ... 15241 : + |
To GenomeBrowser | scaffold2637.1:4106..15241 |
Genes list of scaffold | scaffold2637.1 |
Synonym | pfu_aug2.0_1109.1_31447 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2637.1_30194.t1 | 2 | 1 | PP2C | 100 | 162 | 7.6e-37 | 127.0 | 2.0e-05 | 0.098 | 12.0 |
pfu_aug1.0_2637.1_30194.t1 | 2 | 2 | PP2C | 193 | 356 | 7.6e-37 | 127.0 | 2.9e-36 | 1.4e-32 | 113.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2637.1_30194.t1 | gi|255918296|gb|ACU33963.1| | mitogen-activated protein kinase kinase kinase 7-interacting protein 1 [Crassostrea angulata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_2637.1_30194.t1 |
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Definition | - |
>pfu_aug1.0_2637.1_30194.t1 atgtgcgctgtgaaagggaatttccaaactaaattttgggtggtccgggtggagtttgtaatttgtgtcattgatgaagg caggtcacagattaccaaaatgatgactaatggtcgtctttccaatggttctgtaggctctccaccaagaattggttcac agggccatgctctgagttggactgatgacctacctgtatgtcctctttctggagtagggttctctacaaatcaaatctac cgtgaagacggtttccgcagagaagaccatgaatttgaagatcgaagttttcatttcagatttgatgagaactgctacct atacggagtgtttgatggacatgatggaagtcgagctgctaactttgcagctcaaagagtaccggcagaactgctgcttg gtcagcttgtaggaaaaaatacggatgatgaaatcaaggaagtcctctatcaagcatttattgcagtagaaaagagcttc tttgagtcaattgatcagctttttgcagagaaaacaactatacagttacggcttcctgaggggctaagccactatgacaa agttttacagtatccagacatcatgaagaagttagacgaccttgaagctgagatcacaggggggacaactgccacagtag ctctcacgtacagaaataaactctatgtagctaatgttggtgatacccgtgctatactgtgccagagagatgagggtggt gtactcagtgtctcccagctgtccatcgatcactctctagctaacgaagaggaagtgacccggctgtctcaactccgtct ggacgtggataggctgaagcagcatcgcaggatcggcagctcagactgtaccagatgtattggtgattatcatgtaaaag gaggatacaaggatatagaaatacttgtcaatgccacacatgagcctgtgatagctgagccccatgttgctggtggtttc tccatttctaatcagccaagtttccttatcatcatgtctgacgggttgtatcaggctctacaggacgctacagggacgca caccgtcaacgtagatatagctcgcatggtagccgctgagtttaacatgcagtccacgctgaacggagtagctcaggccg tagttgacagggttgttagaattcaccatgattcttttataggcggaacacctgatgtgaaacagatctgtcagaaaaga ggggacataactcttatggtgagaaactttaactatccattgccgaatgcaatgaatagtccgaccgcatcagggaatta ccatcctgtgtcagtgccattctatcagccgcgtaccgtcagtatgcctccgtctgtcaatatacctaccacagattttt tgtatgtgaacacagagacttcgtctggctctgatgctccctcaccaggggggttaactcctacaccagctggcatgtca gccacagacaccctcactacatcaacaacaatgggatcatccactttagaaacaaatacaagtggtaggtcttatacaag tacggaatcctccactcagagtagtggggagatcaggttcccaagtcgctattaccatagagctaaacttgagttggatt cagaaggaaaagtggaggcatatatagacttcacagaattttatgctgccataaatagactgactgaggctcagcgagaa tctcttaatgcagaaacaaagcctaaatctgcgtatgaccctataaatgaggagtcagaaccaatgtcagcccccgagaa ttaa |
Protein
Protein ID | pfu_aug1.0_2637.1_30194.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2637.1_30194.t1 MCAVKGNFQTKFWVVRVEFVICVIDEGRSQITKMMTNGRLSNGSVGSPPRIGSQGHALSWTDDLPVCPLSGVGFSTNQIY REDGFRREDHEFEDRSFHFRFDENCYLYGVFDGHDGSRAANFAAQRVPAELLLGQLVGKNTDDEIKEVLYQAFIAVEKSF FESIDQLFAEKTTIQLRLPEGLSHYDKVLQYPDIMKKLDDLEAEITGGTTATVALTYRNKLYVANVGDTRAILCQRDEGG VLSVSQLSIDHSLANEEEVTRLSQLRLDVDRLKQHRRIGSSDCTRCIGDYHVKGGYKDIEILVNATHEPVIAEPHVAGGF SISNQPSFLIIMSDGLYQALQDATGTHTVNVDIARMVAAEFNMQSTLNGVAQAVVDRVVRIHHDSFIGGTPDVKQICQKR GDITLMVRNFNYPLPNAMNSPTASGNYHPVSVPFYQPRTVSMPPSVNIPTTDFLYVNTETSSGSDAPSPGGLTPTPAGMS ATDTLTTSTTMGSSTLETNTSGRSYTSTESSTQSSGEIRFPSRYYHRAKLELDSEGKVEAYIDFTEFYAAINRLTEAQRE SLNAETKPKSAYDPINEESEPMSAPEN |